Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842980

Identifier: 50842980

GI number: 50842980

Start: 1624734

End: 1625744

Strand: Direct

Name: 50842980

Synonym: PPA1502

Alternate gene names: NA

Gene position: 1624734-1625744 (Clockwise)

Preceding gene: 50842979

Following gene: 50842981

Centisome position: 63.46

GC content: 58.65

Gene sequence:

>1011_bases
ATGATCAACCGTCCGCTGGCAGCCTTGTCTGCCATGTTCATCGCGCTCGCCACCGGCGCCACCCTGTCCCAGCCGGCCCA
AGCCTCGCCCACCATTCCGCCCGATCCCGCTCTCAAACAGACCATTTCAGATAACGAGAAGGTGGCGAAAGGTCCGGCTG
AGATCAAGCGCGGCCACGTCGACATCGGTCCTCGCATTGTTGACGGAAAGTTCTCCCTCATGGCCCGTGACGACTCCGCG
AACCCGCCAGTCTGGCGCAACACTGACGACACTGTGCTGCGCGTCGCGGACGCTTCGCGTATCGACGTGCCCAACGATGA
CACCTATTCCTTCCTGGGGGACATGCGCGGGGAAAAGGCCTACGTCATTCCTCAGACCCAAGACCAAAAAGTCGTCTGGC
TGGGCTGGAACACCCAAGCCCCCGAGATCGTCAAAAATTTCCCGCGTGGAGCCGATCTCGTCTTCACAGGACATGAAGGC
CCGGGACAAGCTCACATGTTCATTGAAACCGGTTTCGACTCACCCATGCCGCTGTATAACTCCACCAAGCCTGGCGAGCA
GCTGGTTCATATGGAGGCCAATACGCACGTTCATGCCAACTGGGTGTTCTCTGATCCTGGAGCGCAGACCATTTCCGTCG
ACGCTCGCGGTACCGACGACACAGGGGTTAAACATTCTTACTCGACGAAGTTGAGGTTCGCTGTCGGTGACAAAGGGCCC
GCTAACGAAGCCCGCGCCGTAGGACCTTCGCCATCGGTCGCTGCATCTTCTTCGTCAACAGCCGCTGCTACTAACGTCTC
GGCTCCGGCCACAACTGAGAACTCCTTTGACGATTCCGGAGCTGGCACCCTATGGGGGCCTGGGATCATGGCCGGAGCCC
TCATCATTGGCATCATCATCGCCGCTTTGGTGGGACGCTCCAGATCGAAGACATTACGCGACGAAGTGTGGAACGAGGAA
CACACTGGCGCAAGCGAAGCTCATAAAGATGTCGGAAACGAGTCCAGATGA

Upstream 100 bases:

>100_bases
ACACCTTCGATGACCACGTCACCAACTACATCGACCTCATGAGATTCGATGCCGACTCCCTAGCCAAGTGCTTGGGATGA
GGCCCACTGTGGAGGCATCC

Downstream 100 bases:

>100_bases
ATGACCTCGGATCCATCAAGATCACAGACGTAGCCGTCAATGTGGGCGGGCTCCAGGTGCTCCATGACGTGAACATATCG
GCCAGCAAGGGGGACCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Wall Anchor Domain-Containing Protein; Actinobacterial Surface-Anchored Protein Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; TRNA-Dihydrouridine Synthase; Surface-Anchored Membrane Protein; Shikimate Kinase; Surface-Anchored Protein Domain Protein; ABC Transporter-Associated Repeat Protein; Secreted Protein

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHVDIGPRIVDGKFSLMARDDSA
NPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKAYVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEG
PGQAHMFIETGFDSPMPLYNSTKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP
ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIIIAALVGRSRSKTLRDEVWNEE
HTGASEAHKDVGNESR

Sequences:

>Translated_336_residues
MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHVDIGPRIVDGKFSLMARDDSA
NPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKAYVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEG
PGQAHMFIETGFDSPMPLYNSTKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP
ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIIIAALVGRSRSKTLRDEVWNEE
HTGASEAHKDVGNESR
>Mature_336_residues
MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHVDIGPRIVDGKFSLMARDDSA
NPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKAYVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEG
PGQAHMFIETGFDSPMPLYNSTKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP
ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIIIAALVGRSRSKTLRDEVWNEE
HTGASEAHKDVGNESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35661; Mature: 35661

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHHHCCCC
DIGPRIVDGKFSLMARDDSANPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKA
CCCCEEECCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEE
YVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEGPGQAHMFIETGFDSPMPLYN
EEECCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC
STKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP
CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIII
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AALVGRSRSKTLRDEVWNEEHTGASEAHKDVGNESR
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MINRPLAALSAMFIALATGATLSQPAQASPTIPPDPALKQTISDNEKVAKGPAEIKRGHV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHHHCCCC
DIGPRIVDGKFSLMARDDSANPPVWRNTDDTVLRVADASRIDVPNDDTYSFLGDMRGEKA
CCCCEEECCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEE
YVIPQTQDQKVVWLGWNTQAPEIVKNFPRGADLVFTGHEGPGQAHMFIETGFDSPMPLYN
EEECCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC
STKPGEQLVHMEANTHVHANWVFSDPGAQTISVDARGTDDTGVKHSYSTKLRFAVGDKGP
CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCC
ANEARAVGPSPSVAASSSSTAAATNVSAPATTENSFDDSGAGTLWGPGIMAGALIIGIII
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AALVGRSRSKTLRDEVWNEEHTGASEAHKDVGNESR
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA