| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842974
Identifier: 50842974
GI number: 50842974
Start: 1614866
End: 1615828
Strand: Direct
Name: 50842974
Synonym: PPA1496
Alternate gene names: NA
Gene position: 1614866-1615828 (Clockwise)
Preceding gene: 50842966
Following gene: 50842978
Centisome position: 63.07
GC content: 61.06
Gene sequence:
>963_bases ATGATCGCCAGGAGAACCATTCTTGCCAGCGGAGCTGCCTTCGTCACTATCGGATTGACGGGCTGTGGCCACAATTCTCC TGAGAAGAAGGCGACTGAGAAGAAGACGACGCCGGTTCGTGCAACAACTACGGCATCTGCACCACACCGAAGCGACGCGG TATCGACGGAAGCACTGCTAGCGGACCTCGCTACCAAAGCCGCTCGCAGCGTCACTGACGGCCAACTGACGGTGCTCAAC CAGGTTGCCGCAGCTCACCGCCGCCACCTCGAAGTGCTGAGCCAGTCCAACCCATTCTCCGGCAGTACCGCCACACCATC GGCGGCTATTTCCCCCACCCCACGCACCGCTGGCCAGGGATCGCCGCTTGCTCTGTTACAACACCACGAAAAGGCTGCAG CTACCCAGTATCTGGAGATCTGTCAGACGGCTCAGGATTCCTCTGAAACTCTGTTGTGGGCCAGCCTGTCGGTGTTCTGT TCGGCCTTCAATCCTTCTGCTCCAGCTCCCCAGCCGACCCCGAAGGTCGTTCCGGTGACAATCGGGCAGGAACCTCTCAC CAATGCTCAGCAGGCGCTACTGACCCACCTCAACGCCCTCGTCGCAGGCTTGGAGTGGGGTATTGGACGCCTTGGGGAGA ACGACCCGCTGCGCACCTGGGGATGGGACCGACGAGAACAAGTTCTTGCCCAGCGCGCAGAGGTGCGTCAAAGCATTCGG GATGCATCAACAACCCCAACCCCCGACGTGCCCGGGTACCCGATGTCGCCTGCCCCCGTCAACGATGCAGCAACCCGGTC GTTGTGGTCTGGATTGGAGGCGAACGTGCTTTCTGGTTGGGGCCGCGTTACAGCTGCCAGCGGGTCGGCTGCACGTCCCC ATGCAGTCGCTTCAATGGTGAGTCAAACCCAAGTTCTCGCCCATTTGGGTACTGGCGTGACGACCTGGCCAGGTTGGGTC TAA
Upstream 100 bases:
>100_bases TTGTCCGCACTGAGTTTAGCCACTCCCACAACCAGCCGGACTCGGCCGCCTCACCGACGGCTATAGCGATAATGCAGCTC AGGATCGATAAGCTGAAGCC
Downstream 100 bases:
>100_bases GCCACACCTAGGACCACGAATCCTCTCTGGTTAGACTCTCCAGATCAGCTGAACGAGCATTCGCACCGCCAGAACACTGG TAACGATAAGAAACATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV
Sequences:
>Translated_320_residues MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV >Mature_320_residues MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33529; Mature: 33529
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL CCCCCEEHHCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEE IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV HCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCHHHHHHHH SQTQVLAHLGTGVTTWPGWV HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL CCCCCEEHHCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEE IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV HCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCHHHHHHHH SQTQVLAHLGTGVTTWPGWV HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA