Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50842974

Identifier: 50842974

GI number: 50842974

Start: 1614866

End: 1615828

Strand: Direct

Name: 50842974

Synonym: PPA1496

Alternate gene names: NA

Gene position: 1614866-1615828 (Clockwise)

Preceding gene: 50842966

Following gene: 50842978

Centisome position: 63.07

GC content: 61.06

Gene sequence:

>963_bases
ATGATCGCCAGGAGAACCATTCTTGCCAGCGGAGCTGCCTTCGTCACTATCGGATTGACGGGCTGTGGCCACAATTCTCC
TGAGAAGAAGGCGACTGAGAAGAAGACGACGCCGGTTCGTGCAACAACTACGGCATCTGCACCACACCGAAGCGACGCGG
TATCGACGGAAGCACTGCTAGCGGACCTCGCTACCAAAGCCGCTCGCAGCGTCACTGACGGCCAACTGACGGTGCTCAAC
CAGGTTGCCGCAGCTCACCGCCGCCACCTCGAAGTGCTGAGCCAGTCCAACCCATTCTCCGGCAGTACCGCCACACCATC
GGCGGCTATTTCCCCCACCCCACGCACCGCTGGCCAGGGATCGCCGCTTGCTCTGTTACAACACCACGAAAAGGCTGCAG
CTACCCAGTATCTGGAGATCTGTCAGACGGCTCAGGATTCCTCTGAAACTCTGTTGTGGGCCAGCCTGTCGGTGTTCTGT
TCGGCCTTCAATCCTTCTGCTCCAGCTCCCCAGCCGACCCCGAAGGTCGTTCCGGTGACAATCGGGCAGGAACCTCTCAC
CAATGCTCAGCAGGCGCTACTGACCCACCTCAACGCCCTCGTCGCAGGCTTGGAGTGGGGTATTGGACGCCTTGGGGAGA
ACGACCCGCTGCGCACCTGGGGATGGGACCGACGAGAACAAGTTCTTGCCCAGCGCGCAGAGGTGCGTCAAAGCATTCGG
GATGCATCAACAACCCCAACCCCCGACGTGCCCGGGTACCCGATGTCGCCTGCCCCCGTCAACGATGCAGCAACCCGGTC
GTTGTGGTCTGGATTGGAGGCGAACGTGCTTTCTGGTTGGGGCCGCGTTACAGCTGCCAGCGGGTCGGCTGCACGTCCCC
ATGCAGTCGCTTCAATGGTGAGTCAAACCCAAGTTCTCGCCCATTTGGGTACTGGCGTGACGACCTGGCCAGGTTGGGTC
TAA

Upstream 100 bases:

>100_bases
TTGTCCGCACTGAGTTTAGCCACTCCCACAACCAGCCGGACTCGGCCGCCTCACCGACGGCTATAGCGATAATGCAGCTC
AGGATCGATAAGCTGAAGCC

Downstream 100 bases:

>100_bases
GCCACACCTAGGACCACGAATCCTCTCTGGTTAGACTCTCCAGATCAGCTGAACGAGCATTCGCACCGCCAGAACACTGG
TAACGATAAGAAACATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN
QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC
SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR
DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV

Sequences:

>Translated_320_residues
MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN
QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC
SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR
DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV
>Mature_320_residues
MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALLADLATKAARSVTDGQLTVLN
QVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQGSPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFC
SAFNPSAPAPQPTPKVVPVTIGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR
DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMVSQTQVLAHLGTGVTTWPGWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33529; Mature: 33529

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL
CCCCCEEHHCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH
ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCHHHHHHHH
SQTQVLAHLGTGVTTWPGWV
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIARRTILASGAAFVTIGLTGCGHNSPEKKATEKKTTPVRATTTASAPHRSDAVSTEALL
CCCCCEEHHCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHH
ADLATKAARSVTDGQLTVLNQVAAAHRRHLEVLSQSNPFSGSTATPSAAISPTPRTAGQG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SPLALLQHHEKAAATQYLEICQTAQDSSETLLWASLSVFCSAFNPSAPAPQPTPKVVPVT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
IGQEPLTNAQQALLTHLNALVAGLEWGIGRLGENDPLRTWGWDRREQVLAQRAEVRQSIR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
DASTTPTPDVPGYPMSPAPVNDAATRSLWSGLEANVLSGWGRVTAASGSAARPHAVASMV
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCHHHHHHHH
SQTQVLAHLGTGVTTWPGWV
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA