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The map label for this gene is licR [H]

Identifier: 50842960

GI number: 50842960

Start: 1599757

End: 1601679

Strand: Direct

Name: licR [H]

Synonym: PPA1482

Alternate gene names: 50842960

Gene position: 1599757-1601679 (Clockwise)

Preceding gene: 50842944

Following gene: 50842961

Centisome position: 62.48

GC content: 61.83

Gene sequence:

>1923_bases
ATGGACCGAGAAATGTGGATCCTCAGGCAACTGGAGACATCGCTGACAGCCTCCGCCGAAGCGCTGGCAGAACGTCTGCA
GGTCAGCCCCCGTACCATCACCAACGCCATCAACACGCTCAACCGGATGCTGGCCCCTGCGGCGTCCGTACGTCCCACCG
GCGGCCGTTACCGCCTCTACATTCTCGACCCACAGGAATACAGCCAAATCCGCAGTCGTCTGGTCCGCGCCACGGACTCC
CTCAACGACCCACGTCATCGCCGCGCACAGGAGTTCGGAGTCCTGCTGTCTGCCAAACACCCGGTGACCTCGGACGACCT
GGCCGACATCGTCTGCACCTCCCGAACAACCGTCCTGGCCGACATCGCCCGATTGCGTGAAGCCCTGAAACCCCTCGGAG
TACGCATCGAGGGGCGTTCCAACCAGGGTTTCAGCCTCGCCGCCGAGGAACTCGATCTGCGTCTGGCCGAACTAACCCTC
TACCCCGCCGAACTCGTCGACGAGTACCCTATCGACGACGATATCGTCGCCGTCGTTTCCCGGATCACCGGGCAGGCTCA
CCTGTCCAAGCCATCACGTCATTATGTGCGTCGCTGGCTCACCGTTCTACTCGATCGGACCCTCACCGGCCACCCACTAG
ACGCGATGTCCGAGGAGTACCAACGTCTTCGCAACACCCCCGCTCACCGCATTGCTTCCAAACTTCTCACCGAAGCTGAA
GATCTCGTTTCGACCACCTTCCCAATCGAGGAGGAGCTCTTCCTCGCCATGTCAGTCGCCGGAATGCGCACCCCCGACAG
TGCGCAGGGTCGTCAGCTCTTCCCCGCTGACGAGGAGGTTCCCGGCCTCGTCGACGCCATCTTTGAACGTATCGCCGAGA
TCATGCAGATCCATCTGGACGCCGACGAGCTTGCTGACGAGTTCGCCCACCACCTCACGTTCATGCTCAACCGGATACGT
TTTCGCGTCACGATCGACGAGGAGTCGGTGCGCAGCATTCGCTATCAGTACCCGGTGGCCCATCGGATGGCCGAGATCAG
CCGCGACGTCATCGAGGAACGCACCGGTATGCGGATCAGTGACTCCGAAACCGGACTACTGACGGGCTATCACCAAGTAT
TCCTCGACTCCCACCGTGCCTGCCCCTACCTCAGGCTGGCGATCGTCACAGCGACCGGACGGGTCTCAGCCCACCTCATG
CGGATCCAGCTCGACAAAGTGCTCCCCCACGGCACCAAGTACCTCATGCTGACCGGCGACGAGGCAGACGAGTCGACGCT
GGCCAGAACGGATCTCGTCGTCGCCACCCCCGATGTCGACATCACGACCCTTGCCGTCGGCGACGTTCCAGTCATTCAAC
TCGGCCAGGTCTTCGATCCCGCCGAACTCATCAGCCGGATGTCAAGGCTAAACCTGCGTGGTCACGTCGACCTTCAGCTC
ACCGGGGCCAATTCGTCATTACTGATGTCGATGCTCTCCCCCGACCGTTTCATGGCCATGCCAGCGGGAACCGATTACTG
GTCGGCGACCGAGGCCCTCGTAGCCTACTTAATCGACCAGGGTCTGGTCGACGAGTCCTTCCTGGCCACACTGCGGGCTC
GAGAGAACGAAGCGACCATGCTACTCGACGGTCTCGTCGGATTTCCCCACGCCACCATCCCAGGGGCCGAACGCATCGTG
CTGGCGATGGCGACCATTCCGCGCCGCCCAGAGCAGCCCGGTGCCCGAGTCGTTTTCCTTATGGGTGTTCCCGACAAAGC
CGACTACGACGACACCATCCTCGTCACCGTCTACGACGAGATCATCCGCCTGACCAACGACCCAGACCTGCTCAACCGGC
TAAGCCAGCTCACCAGTTATGAAGACGTCTTCTGGCTCATGGCCTCCCGCCCCTGCAATCCCGTCTGCCCCGAGGAGAGA
TGA

Upstream 100 bases:

>100_bases
AAAAATCGGAAAGAAGCACGCACAATGCCGCAAGACCAGGGCGCAGGTGCGGTGTTAACTTCATGCCAACCAACGAGGTC
GAGCACAAGGAGGTGATCTC

Downstream 100 bases:

>100_bases
TGTTCTGGCCCGTTCTTGCCACCGTCGCAATCATCTATGTGTGCAATGCCACCCTAGCCATGCGCCAGATGAGGAATTTC
TCCACGACCTACACACTGCT

Product: putative regulator of sorbitol operon

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLYILDPQEYSQIRSRLVRATDS
LNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLADIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTL
YPAELVDEYPIDDDIVAVVSRITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE
DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLDADELADEFAHHLTFMLNRIR
FRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRISDSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLM
RIQLDKVLPHGTKYLMLTGDEADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL
TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATMLLDGLVGFPHATIPGAERIV
LAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDEIIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER

Sequences:

>Translated_640_residues
MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLYILDPQEYSQIRSRLVRATDS
LNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLADIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTL
YPAELVDEYPIDDDIVAVVSRITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE
DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLDADELADEFAHHLTFMLNRIR
FRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRISDSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLM
RIQLDKVLPHGTKYLMLTGDEADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL
TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATMLLDGLVGFPHATIPGAERIV
LAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDEIIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER
>Mature_640_residues
MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLYILDPQEYSQIRSRLVRATDS
LNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLADIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTL
YPAELVDEYPIDDDIVAVVSRITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE
DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLDADELADEFAHHLTFMLNRIR
FRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRISDSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLM
RIQLDKVLPHGTKYLMLTGDEADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL
TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATMLLDGLVGFPHATIPGAERIV
LAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDEIIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 71730; Mature: 71730

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
ILDPQEYSQIRSRLVRATDSLNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLA
EECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHCCCHHHHH
DIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTLYPAELVDEYPIDDDIVAVVS
HHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHEHHHHEECCHHHHHCCCCCHHHHHHHH
RITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE
HHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLD
HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
ADELADEFAHHLTFMLNRIRFRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRIS
HHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEC
DSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLMRIQLDKVLPHGTKYLMLTGD
CCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHEEHHHHCCCCCEEEEEECC
EADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL
CCCCCHHHHCCEEEECCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEE
TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATM
ECCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHE
LLDGLVGFPHATIPGAERIVLAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDE
EEHHHHCCCCCCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHH
IIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER
HHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDREMWILRQLETSLTASAEALAERLQVSPRTITNAINTLNRMLAPAASVRPTGGRYRLY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
ILDPQEYSQIRSRLVRATDSLNDPRHRRAQEFGVLLSAKHPVTSDDLADIVCTSRTTVLA
EECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHCCCHHHHH
DIARLREALKPLGVRIEGRSNQGFSLAAEELDLRLAELTLYPAELVDEYPIDDDIVAVVS
HHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHEHHHHEECCHHHHHCCCCCHHHHHHHH
RITGQAHLSKPSRHYVRRWLTVLLDRTLTGHPLDAMSEEYQRLRNTPAHRIASKLLTEAE
HHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DLVSTTFPIEEELFLAMSVAGMRTPDSAQGRQLFPADEEVPGLVDAIFERIAEIMQIHLD
HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
ADELADEFAHHLTFMLNRIRFRVTIDEESVRSIRYQYPVAHRMAEISRDVIEERTGMRIS
HHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEC
DSETGLLTGYHQVFLDSHRACPYLRLAIVTATGRVSAHLMRIQLDKVLPHGTKYLMLTGD
CCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHEEHHHHCCCCCEEEEEECC
EADESTLARTDLVVATPDVDITTLAVGDVPVIQLGQVFDPAELISRMSRLNLRGHVDLQL
CCCCCHHHHCCEEEECCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEEE
TGANSSLLMSMLSPDRFMAMPAGTDYWSATEALVAYLIDQGLVDESFLATLRARENEATM
ECCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHE
LLDGLVGFPHATIPGAERIVLAMATIPRRPEQPGARVVFLMGVPDKADYDDTILVTVYDE
EEHHHHCCCCCCCCCCHHEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHH
IIRLTNDPDLLNRLSQLTSYEDVFWLMASRPCNPVCPEER
HHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]