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The map label for this gene is 50842957

Identifier: 50842957

GI number: 50842957

Start: 1598326

End: 1598652

Strand: Reverse

Name: 50842957

Synonym: PPA1479

Alternate gene names: NA

Gene position: 1598652-1598326 (Counterclockwise)

Preceding gene: 50842958

Following gene: 50842956

Centisome position: 62.44

GC content: 58.41

Gene sequence:

>327_bases
ATGACGGAAACGAACAACCTCGGGTTCATCGAAAACCTCGCCGCCCAGATTGATTACTCTGACGGGTCAACTGTTTCCAA
AACTGTCATGCGAGCCGAGGGGGTGAACATCGTCCTGTTCTCCTTTGCTGCCGGAGAGGAGCTGTCGGAGCACACTGCCG
CGATGCCCGTCATCGTCGAGGCTCTTGAAGGTCAGCTCGAAATCACTGCCGAGGGGCGCACCGTGACTCTGAACCCTGGG
GGCATAGTGCACTTCACAACACGCCTGCCCCACGCGGTCAGGGCAGTTGAGGCCTCGAAAATGGCCCTGTACATGATCAC
CGCGTGA

Upstream 100 bases:

>100_bases
CGGGGCTTCTTCGCCCGCAACCATCGTGCCGGGACCGTGCTCGCTGCGGGTGGATCATAATGATCACTCCGCCACAGCAA
TGACCATGAAGGGATACCCC

Downstream 100 bases:

>100_bases
CTTTGGGCAGACCAGCTTGTTGAAGCCCTCCTGAGTCGGGATACTGGCTCCGATGAATACTCTCCAGTCTGGCGTCCTCG
TCGTTGACAAACCTGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin Region; Cytoplasmic Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel Protein; Double-Stranded Beta-Helix Domain Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVEALEGQLEITAEGRTVTLNPG
GIVHFTTRLPHAVRAVEASKMALYMITA

Sequences:

>Translated_108_residues
MTETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVEALEGQLEITAEGRTVTLNPG
GIVHFTTRLPHAVRAVEASKMALYMITA
>Mature_107_residues
TETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVEALEGQLEITAEGRTVTLNPGG
IVHFTTRLPHAVRAVEASKMALYMITA

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11538; Mature: 11407

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVE
CCCCCCCCHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHEE
ALEGQLEITAEGRTVTLNPGGIVHFTTRLPHAVRAVEASKMALYMITA
CCCCCEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure 
TETNNLGFIENLAAQIDYSDGSTVSKTVMRAEGVNIVLFSFAAGEELSEHTAAMPVIVE
CCCCCCCHHHHHHHEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHEE
ALEGQLEITAEGRTVTLNPGGIVHFTTRLPHAVRAVEASKMALYMITA
CCCCCEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA