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The map label for this gene is ftsY [H]

Identifier: 50842926

GI number: 50842926

Start: 1563618

End: 1564808

Strand: Reverse

Name: ftsY [H]

Synonym: PPA1447

Alternate gene names: 50842926

Gene position: 1564808-1563618 (Counterclockwise)

Preceding gene: 50842927

Following gene: 50842925

Centisome position: 61.12

GC content: 61.88

Gene sequence:

>1191_bases
GTGAACCCCATAACCCTGATCTGGATTATCCTCGGCATACTCGTCCTGGTGACGGTGGTTGCTGCCGTCACTGCTGGAGT
TTCGCGGCGTAAGGCTCTGCGTGAGGGGTCTAAGCCTGCCCAGGTGTCCCCGGCTCCCACGGAAAGTGGGAAAACAGTTC
CCGAAGCGGAGACTCCAGCGGGCGGCGAGTCTGCTGTCGGGCGCCCCGAGTCAGAAGCGTCACAGGTCGCTGAACCAGCG
GTCGAGGCGCCCGAGGCGCCAGGCTCGCGGATGGCCCGATTGCGGCGTCGTCTGGCTAACAGCAACAATGCGCTTGCTCG
TGGTTTGGCCGAGTTGCTGAGCGCTGACAAGCTCGACGATGACGCCTGGGATGACTTCGAGACCACCCTTATCACCTCCG
ATCTGGGTGTTGGTCCGACGACGGAGCTCGTCGAGAAGCTGCGCTCGGAACTGGCTATTGATGGGATCTCTGACCCGGCC
CATGCTCGCGAGGTTCTGCACCATGAGCTTGTCGAACTCGTCGGATCGGATATGGATCGTTCCATCAACCTAGACCGCCT
GGAAGGCAAGCCGGCTGTCGTCCTCATGGTGGGCGTCAATGGCACGGGTAAGACGACGACCTGCGGCAAGCTGGCGCGCG
TTCTCGTCGCCGAGGGAAAGACGGTCCTCCTCGGTGCAGCAGACACCTTCCGCGCCGCCGCTGGCGAGCAGCTGGAGACG
TGGGGAGAACGCGTCGGTGTGCGTACCGTCCGCAAGGACGCGGGCGCCGATCCTGCCTCCGTCGCTTACGAGGCCGTTCA
GACTGGCATTGATGAAGGTGTTGATGTCGTGCTCGTTGACACTGCTGGGCGACTTCACACCAAGGCCGGTCTCATGGATG
AACTGGGTAAGGTCAAGCGTGTCATCGAGAAGCTTGCACCGGTGAGCGAGGTGTTGCTTGTTTTGGACGCCACCACCGGG
CAGAATGGCCTAGCTCAAGCCCGCGTCTTCTCGGAGGTCGTCGACGTGACTGGCATCGTGTTGTCAAAGCTTGACGGTTC
CGCGAAGGGCGGCATCGTTGTCCAAGTGCAGCGTGAGCTAGGTGTGCCCGTCAAGCTCATCGGTCTCGGCGAGGGAGCCG
ACGATCTGGCCCCCTTTGATGCTGATAACTTTGTCACCGGTCTCATGGGTGACGATTCTGCCGAGTGCTGA

Upstream 100 bases:

>100_bases
ACACCGCCACCCGTGTGGGTGAAGATCTCAGCGGTGTTCGACATCGCTGAGGCGGTCTGCCCTCGTGGTTTTGTGAATTG
ACCGACTAATATCGGCCGAC

Downstream 100 bases:

>100_bases
GGTCCGATAAGTGACAGATATCGCGTGGTTTGCCCCGACTGGTGGGGTCATGATGGTCAGTATCCTCAGCCATAAGCTGT
GCGTAGCGGTGCTTATTGCG

Product: signal recognition particle receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPAGGESAVGRPESEASQVAEPA
VEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDDDAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPA
HAREVLHHELVELVGSDMDRSINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET
WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKRVIEKLAPVSEVLLVLDATTG
QNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQRELGVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC

Sequences:

>Translated_396_residues
MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPAGGESAVGRPESEASQVAEPA
VEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDDDAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPA
HAREVLHHELVELVGSDMDRSINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET
WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKRVIEKLAPVSEVLLVLDATTG
QNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQRELGVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC
>Mature_396_residues
MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPAGGESAVGRPESEASQVAEPA
VEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDDDAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPA
HAREVLHHELVELVGSDMDRSINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET
WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKRVIEKLAPVSEVLLVLDATTG
QNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQRELGVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=268, Percent_Identity=32.4626865671642, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI226371618, Length=248, Percent_Identity=33.4677419354839, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI295424842, Length=255, Percent_Identity=32.9411764705882, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI23308697, Length=255, Percent_Identity=32.9411764705882, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=35.0746268656716, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI1789874, Length=328, Percent_Identity=42.6829268292683, Blast_Score=248, Evalue=7e-67,
Organism=Escherichia coli, GI1788963, Length=228, Percent_Identity=40.3508771929825, Blast_Score=156, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17539958, Length=268, Percent_Identity=33.5820895522388, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI193206261, Length=288, Percent_Identity=30.2083333333333, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=289, Percent_Identity=30.7958477508651, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=267, Percent_Identity=29.9625468164794, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17647949, Length=305, Percent_Identity=30.4918032786885, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24641198, Length=261, Percent_Identity=31.4176245210728, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 41262; Mature: 41262

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GGESAVGRPESEASQVAEPAVEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDD
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
DAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPAHAREVLHHELVELVGSDMDR
CCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET
CCCCHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHH
WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
VIEKLAPVSEVLLVLDATTGQNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQREL
HHHHHCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHH
GVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC
CCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MNPITLIWIILGILVLVTVVAAVTAGVSRRKALREGSKPAQVSPAPTESGKTVPEAETPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
GGESAVGRPESEASQVAEPAVEAPEAPGSRMARLRRRLANSNNALARGLAELLSADKLDD
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
DAWDDFETTLITSDLGVGPTTELVEKLRSELAIDGISDPAHAREVLHHELVELVGSDMDR
CCCCCHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
SINLDRLEGKPAVVLMVGVNGTGKTTTCGKLARVLVAEGKTVLLGAADTFRAAAGEQLET
CCCCHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHH
WGERVGVRTVRKDAGADPASVAYEAVQTGIDEGVDVVLVDTAGRLHTKAGLMDELGKVKR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
VIEKLAPVSEVLLVLDATTGQNGLAQARVFSEVVDVTGIVLSKLDGSAKGGIVVQVQREL
HHHHHCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHH
GVPVKLIGLGEGADDLAPFDADNFVTGLMGDDSAEC
CCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]