Click here to switch to the map view.

The map label for this gene is 50842896

Identifier: 50842896

GI number: 50842896

Start: 1536349

End: 1536822

Strand: Reverse

Name: 50842896

Synonym: PPA1415

Alternate gene names: NA

Gene position: 1536822-1536349 (Counterclockwise)

Preceding gene: 50842898

Following gene: 50842895

Centisome position: 60.03

GC content: 61.18

Gene sequence:

>474_bases
GTGTCTGTTCCACTATCTCCGACCGGCGGCGACATGGGAGACGCCGATCCCCGAGCTCGCGCCGTCCTGGCCACTTGTCT
TACTGACGATCCGGAGGTTTACCGACAGTCCTACCTTGAAGCAGTGTCCACGTTGTGCGCAGGAGTACGCCTATTCATGC
CGGTGATGGCAGATGAGGAGGGGGAAATCGGTGCTGTGAAGCTCACTAACAAGTTAGGAGACACCGCTCTGTTGGCATTC
ACCGGGATTGACTCCCTCACAGCGTGGGACTCGCGGGCTCGTCCGGTACCGGGCCGTCTCCCAGATCTTGCGGCCACAGT
GACCGAGGTGGCGGCTGATGCCCTTCTTATTGACGTGGCTGGTCCAGCGCCCCTCGTCATCGGGACTGATGTCCTCAAGC
CAATCGAGGATGGCGGGCGACTCGTGAAACTCGATGATGGTTGGGGATGGGCGCGCAGCGGGGGGTTGGGATGA

Upstream 100 bases:

>100_bases
CGGTCGGTTCGCTCATACCTCCACTGTTCCACATCCAGGGGCGTACTTGCGTTCTGGGACTCGCTGATTCTGGCGTTGAC
TGTCAACTAGTGTTCTGCAG

Downstream 100 bases:

>100_bases
CCCTGTCAGTTTCGCCGGTGTCGTCCTCTCGCTACGTTTAGCCCCGATTTGTGGCGATGTCATCTCTTGCCGTACCATGA
GCGAAGCGATCAGGGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEEGEIGAVKLTNKLGDTALLAF
TGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVAGPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG

Sequences:

>Translated_157_residues
MSVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEEGEIGAVKLTNKLGDTALLAF
TGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVAGPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG
>Mature_156_residues
SVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEEGEIGAVKLTNKLGDTALLAFT
GIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVAGPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16290; Mature: 16159

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEIGAVKLTNKLGDTALLAFTGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVA
CCEEEEEECCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECC
GPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG
CCCCEEECHHHHHHHCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SVPLSPTGGDMGDADPRARAVLATCLTDDPEVYRQSYLEAVSTLCAGVRLFMPVMADEE
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEIGAVKLTNKLGDTALLAFTGIDSLTAWDSRARPVPGRLPDLAATVTEVAADALLIDVA
CCEEEEEECCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECC
GPAPLVIGTDVLKPIEDGGRLVKLDDGWGWARSGGLG
CCCCEEECHHHHHHHCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA