| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842827
Identifier: 50842827
GI number: 50842827
Start: 1466728
End: 1467237
Strand: Direct
Name: 50842827
Synonym: PPA2389
Alternate gene names: NA
Gene position: 1466728-1467237 (Clockwise)
Preceding gene: 50842826
Following gene: 50842839
Centisome position: 57.29
GC content: 57.45
Gene sequence:
>510_bases GTGCATGAAGATAAACGGGCCGACGATGATGAACCCGCCCAACACTGCCCACAACCAGAAATCCCCCGCCGTCACGCCAG ACTTCATGCCTCATCGATTCTGTTCGCGCCCAATACTCCCACAGACCTGATGCATCCAGATGTACATGGCAATTCCAATA GTCAGCGGAGAGATCACCAGGGCGACGAGCCAGAAATTCATAGTACGTCGGCCGTCCCACCGCGATGCGATGACATTGAG GTCCTCGCCGGCCCGGGCCAGCACCCAGACGTCGTAGATGCCGAAGGTGATTATCCCCAGCAGAATGTACTTGAGCAGGG ACCGGTTGGTGTCAAAAGTGCCCATCTGAAACGCCGGAGCGCAAGGCTGCGGGACACTGCGCGGGTCACATGGCTGCTGG CTTTAGGACAACGGCTGACCATAGGTCTGCCAATCCTGGTCAGAATACGGCTAGGACGCGAACGAAACCTCGCCGCGCTG CGGAGGAACATTGGATTCAGGATTGAATGA
Upstream 100 bases:
>100_bases CCCTGTCACTGGCACCGCCACAGCATGATCCGCATCAGTGACAACGTCAGCCGCGCACGTTATAGTCGGCAGCCAGCGCA TTCACGGCGTGCAGGAACTT
Downstream 100 bases:
>100_bases CACGAAATTCTCTTCTCCTCGGAAGAAATGATACCAGAACATCTCCGATGTCCAGAATCAGATTACCTTACCGAAGCGAC CGTAAAAGTCCTGTCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MHEDKRADDDEPAQHCPQPEIPRRHARLHASSILFAPNTPTDLMHPDVHGNSNSQRRDHQGDEPEIHSTSAVPPRCDDIE VLAGPGQHPDVVDAEGDYPQQNVLEQGPVGVKSAHLKRRSARLRDTARVTWLLALGQRLTIGLPILVRIRLGRERNLAAL RRNIGFRIE
Sequences:
>Translated_169_residues MHEDKRADDDEPAQHCPQPEIPRRHARLHASSILFAPNTPTDLMHPDVHGNSNSQRRDHQGDEPEIHSTSAVPPRCDDIE VLAGPGQHPDVVDAEGDYPQQNVLEQGPVGVKSAHLKRRSARLRDTARVTWLLALGQRLTIGLPILVRIRLGRERNLAAL RRNIGFRIE >Mature_169_residues MHEDKRADDDEPAQHCPQPEIPRRHARLHASSILFAPNTPTDLMHPDVHGNSNSQRRDHQGDEPEIHSTSAVPPRCDDIE VLAGPGQHPDVVDAEGDYPQQNVLEQGPVGVKSAHLKRRSARLRDTARVTWLLALGQRLTIGLPILVRIRLGRERNLAAL RRNIGFRIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18954; Mature: 18954
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEDKRADDDEPAQHCPQPEIPRRHARLHASSILFAPNTPTDLMHPDVHGNSNSQRRDHQ CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GDEPEIHSTSAVPPRCDDIEVLAGPGQHPDVVDAEGDYPQQNVLEQGPVGVKSAHLKRRS CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH ARLRDTARVTWLLALGQRLTIGLPILVRIRLGRERNLAALRRNIGFRIE HHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MHEDKRADDDEPAQHCPQPEIPRRHARLHASSILFAPNTPTDLMHPDVHGNSNSQRRDHQ CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GDEPEIHSTSAVPPRCDDIEVLAGPGQHPDVVDAEGDYPQQNVLEQGPVGVKSAHLKRRS CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH ARLRDTARVTWLLALGQRLTIGLPILVRIRLGRERNLAALRRNIGFRIE HHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA