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The map label for this gene is yqgE [C]

Identifier: 50842819

GI number: 50842819

Start: 1460928

End: 1461506

Strand: Reverse

Name: yqgE [C]

Synonym: PPA1339

Alternate gene names: 50842819

Gene position: 1461506-1460928 (Counterclockwise)

Preceding gene: 50842820

Following gene: 50842818

Centisome position: 57.08

GC content: 59.76

Gene sequence:

>579_bases
ATGGACCTCGTGATACTCGCGAACCCTCTCAAGGTCGGTGACTTGCTTGTGGCAAGTCGCCAAATTGACGAGGGTATTTT
CTACGAGTCCGTCGTTTATCTCATCGACGTTGCTCTTGATGGCGTCCTTGGAGTTATCGTCAACCAACCATGCACAGCGG
GAACCTTGCACAGACAACTTCCTGGCTGGGTGCATTTAGCTACCCCGCCGCAGGATCTCTTCCTCGGCGGTCCGATGTCG
CCAAATGGGGCCATCTGCCTGGCCCGAGTGCAACGCTCGAGTGAGGAACCTCCCGGATGGCGACGTGTCCAAGGACTAAC
TGGTCTGCTCCACCTCGACACCCCGACTGAACTTGTGGAAGGTGCGTTCACCGACGTCCGGATCTTCGCGGGATACGCCG
AATGGGTGCCCGGCCAGCTAGAGGCCGAACTCATTCGCGGAGACTGGATCAGAGCCGTGGCTCACCCCGAAGACATCTTT
TCCTCTGAGCCGCGAGGTTTATGGCGGGCGGTGCTGCATCGTCAGAACGGCCCCGCGGCGTTGCTCGCAACGGCGACCGA
CACCCCTGCCCTCAACTGA

Upstream 100 bases:

>100_bases
GGCCTGGCACGTCGCATCGAGGTGGAATCGGGGTCGGCCTGTGATTATCTTAAGAGTCCGTTGACGATCGTGCCCCGGTT
CCCTGCCCGTGGGTGACACA

Downstream 100 bases:

>100_bases
TCACCGGCCAGGAGTATGGGGGCTACCATATGCACCATCTCAGAATCCAGTCAGGAGGTCCACGGTGGACGCCGCCGGTG
ATCATGGGCCGATTCTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQLPGWVHLATPPQDLFLGGPMS
PNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVEGAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIF
SSEPRGLWRAVLHRQNGPAALLATATDTPALN

Sequences:

>Translated_192_residues
MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQLPGWVHLATPPQDLFLGGPMS
PNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVEGAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIF
SSEPRGLWRAVLHRQNGPAALLATATDTPALN
>Mature_192_residues
MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQLPGWVHLATPPQDLFLGGPMS
PNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVEGAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIF
SSEPRGLWRAVLHRQNGPAALLATATDTPALN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20827; Mature: 20827

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQL
CCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PGWVHLATPPQDLFLGGPMSPNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVE
CCEEEECCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCHHHHHH
GAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIFSSEPRGLWRAVLHRQNGPAA
CCCCCEEEEECHHHCCCCCHHHHHHHCHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCEE
LLATATDTPALN
EEEECCCCCCCC
>Mature Secondary Structure
MDLVILANPLKVGDLLVASRQIDEGIFYESVVYLIDVALDGVLGVIVNQPCTAGTLHRQL
CCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PGWVHLATPPQDLFLGGPMSPNGAICLARVQRSSEEPPGWRRVQGLTGLLHLDTPTELVE
CCEEEECCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEECCHHHHHH
GAFTDVRIFAGYAEWVPGQLEAELIRGDWIRAVAHPEDIFSSEPRGLWRAVLHRQNGPAA
CCCCCEEEEECHHHCCCCCHHHHHHHCHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCEE
LLATATDTPALN
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]