| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842759
Identifier: 50842759
GI number: 50842759
Start: 1388098
End: 1388511
Strand: Reverse
Name: 50842759
Synonym: PPA1278
Alternate gene names: NA
Gene position: 1388511-1388098 (Counterclockwise)
Preceding gene: 50842760
Following gene: 50842756
Centisome position: 54.23
GC content: 60.39
Gene sequence:
>414_bases ATGAGCATGACAGCAGAAGTTGGGACGGTCTATGACGTGATCGCCCATCGTGAGGTCTCACCTGAGGCGAATTTCTGGGT ATTCGAGATTCCGGCCCTCGGGGCGGTTGGGCAAGCAGTGAAGTTGGGTCAGGTCGCAGACGAGGCCCGCGGAATCATTA CCGCCTGGGATGAGGATGGACCCGATGAGAACGCGTTTAAGGTTCACGTTCGCTTGGATGGTGAGGCCGACGCCCGCCGC ATGTGGGAAGAAGGTGAGGAGGAAGAGCGCCAAGCCCGGAAGGTGCTTGATCACGCGGCCACACGCAAGCGTGAGGCCGT CACTCTGCTGAGGGTCGAGAAGAAATACAGCGCCAACGACACCGCCCGCGTGCTTGGGGTGACCCGCCAAAGGGTTTACC AACTCACCCGCTGA
Upstream 100 bases:
>100_bases CCGGGCGTGTATCGATACCAACAGGTCACCGGCTCATGTCCGCTGGTGTCCTGGCGCAGCTGGAGCGAGCAGGCGTGACG AGTCCGAAGGAGTGAAAGTA
Downstream 100 bases:
>100_bases TGCCCCTCTGAATACTTACCAGCTGCTCGAAAACCACCGTTTTCGAACGTGGCTCAGAATGGCAGATCCTGTCGATGAGA CCGTCCTCCCACGGTCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDGPDENAFKVHVRLDGEADARR MWEEGEEEERQARKVLDHAATRKREAVTLLRVEKKYSANDTARVLGVTRQRVYQLTR
Sequences:
>Translated_137_residues MSMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDGPDENAFKVHVRLDGEADARR MWEEGEEEERQARKVLDHAATRKREAVTLLRVEKKYSANDTARVLGVTRQRVYQLTR >Mature_136_residues SMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDGPDENAFKVHVRLDGEADARRM WEEGEEEERQARKVLDHAATRKREAVTLLRVEKKYSANDTARVLGVTRQRVYQLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15452; Mature: 15320
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDG CCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCC PDENAFKVHVRLDGEADARRMWEEGEEEERQARKVLDHAATRKREAVTLLRVEKKYSAND CCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TARVLGVTRQRVYQLTR HHHHHHHHHHHHHHHCC >Mature Secondary Structure SMTAEVGTVYDVIAHREVSPEANFWVFEIPALGAVGQAVKLGQVADEARGIITAWDEDG CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCC PDENAFKVHVRLDGEADARRMWEEGEEEERQARKVLDHAATRKREAVTLLRVEKKYSAND CCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TARVLGVTRQRVYQLTR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA