| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842757
Identifier: 50842757
GI number: 50842757
Start: 1386164
End: 1386718
Strand: Direct
Name: 50842757
Synonym: PPA2384
Alternate gene names: NA
Gene position: 1386164-1386718 (Clockwise)
Preceding gene: 50842750
Following gene: 50842758
Centisome position: 54.14
GC content: 57.48
Gene sequence:
>555_bases TTGAGCGTCTTCGTGGGTGTGAGCGAGCGGAACAGGGTGGGCTGCATCGGGCGCAATCGGTGTGGCGTTTACGGGTGCCC GATAGCGTCTCGCGGCGTCATAGTGGCCGTGACCGTCGTCCTGGAATGGTTCGTGAATCCCCTAGTCAAATCCACTGTGA CACTGGTGACACACTCCTCCACACCCCCCTTATTTGGTAGAGGTCTGCAGCCTGGTAGTCCTCTAAGCGCCATAACAGTC GTGTGTTCATCGGCTTCTTCCAAGGTTTGTGTTAGCGCGATGTTGCGTAATAGCCTATTCCTACGAAAACGGAGTGGGAG TCTGAGGACATCCCACCCAACCCCCGGTGGGATGTCCAGCACGACGCGGACCGAAGCCGGGGGCTTCTTTGTGTCTGGAG TCACAATCTCACTGTTACGATGTGGGGCCGCCACGCTAGTTCTTTTCTTGCCATCGTCAATCGTGTCTCCTATTCGGGTA AAGGCGTTGGGTTATGGTCAGGTGCCGGTGTGGTGGGGTGGCCAGTGCGGTGGTGTTAGTGGGCAGGGCTGTTGA
Upstream 100 bases:
>100_bases ATGATCTGGCGTGGCCGAGGGTGGATACGTTGTCGCAGTTGACGTCGTCGTCGCGGCGGACGGTGTTTCGGGCTGTGGAT GTTAGTAGGCGCAGGCTTGA
Downstream 100 bases:
>100_bases TGCTTGGTTAGGTGCGGGCAGGATGATGTTGGGGTGGTTCATCCAGTGAAGTCGCGGTAGGCGTTGATGCGCCGAGCGAC GTGTTCCCAACGTGCACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSVFVGVSERNRVGCIGRNRCGVYGCPIASRGVIVAVTVVLEWFVNPLVKSTVTLVTHSSTPPLFGRGLQPGSPLSAITV VCSSASSKVCVSAMLRNSLFLRKRSGSLRTSHPTPGGMSSTTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRV KALGYGQVPVWWGGQCGGVSGQGC
Sequences:
>Translated_184_residues MSVFVGVSERNRVGCIGRNRCGVYGCPIASRGVIVAVTVVLEWFVNPLVKSTVTLVTHSSTPPLFGRGLQPGSPLSAITV VCSSASSKVCVSAMLRNSLFLRKRSGSLRTSHPTPGGMSSTTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRV KALGYGQVPVWWGGQCGGVSGQGC >Mature_183_residues SVFVGVSERNRVGCIGRNRCGVYGCPIASRGVIVAVTVVLEWFVNPLVKSTVTLVTHSSTPPLFGRGLQPGSPLSAITVV CSSASSKVCVSAMLRNSLFLRKRSGSLRTSHPTPGGMSSTTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRVK ALGYGQVPVWWGGQCGGVSGQGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19075; Mature: 18943
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFVGVSERNRVGCIGRNRCGVYGCPIASRGVIVAVTVVLEWFVNPLVKSTVTLVTHSS CEEEEECCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC TPPLFGRGLQPGSPLSAITVVCSSASSKVCVSAMLRNSLFLRKRSGSLRTSHPTPGGMSS CCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCC TTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRVKALGYGQVPVWWGGQCGGVS CCCCCCCCEEEHHHHHHHHHHCHHHHEEHHCHHHCCCEEEEEECCCCCCEEECCCCCCCC GQGC CCCC >Mature Secondary Structure SVFVGVSERNRVGCIGRNRCGVYGCPIASRGVIVAVTVVLEWFVNPLVKSTVTLVTHSS EEEEECCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC TPPLFGRGLQPGSPLSAITVVCSSASSKVCVSAMLRNSLFLRKRSGSLRTSHPTPGGMSS CCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCC TTRTEAGGFFVSGVTISLLRCGAATLVLFLPSSIVSPIRVKALGYGQVPVWWGGQCGGVS CCCCCCCCEEEHHHHHHHHHHCHHHHEEHHCHHHCCCEEEEEECCCCCCEEECCCCCCCC GQGC CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA