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The map label for this gene is yaeJ [H]

Identifier: 50842712

GI number: 50842712

Start: 1340258

End: 1340683

Strand: Reverse

Name: yaeJ [H]

Synonym: PPA1232

Alternate gene names: 50842712

Gene position: 1340683-1340258 (Counterclockwise)

Preceding gene: 50842713

Following gene: 50842711

Centisome position: 52.37

GC content: 57.04

Gene sequence:

>426_bases
GTGAAGGTAGGTGACATTGAGGTTGTTCCTGGTTTCATTATCGCTGAGACAGATTTGCGGGAGAGATTTTCACACAGTTC
TGGTCCTGGCGGGCAAGGGGTCAACACGACCGATTCCAGAGTGGAACTGATGTTTGACGTCGCTCGTTCCGGTGCCGTCC
CGGACCGTCTACGCCCGGTAATCATGTCGGTATTGAAAAATCGACTCGTAGACGGTGTGTTGACGGTAACGGTTCATGAT
GAGCGGTCTCAGCTTGCGAATCGCAAGCTAGCTCGCGCTCGTCTCGTCGGACTGTTGCAAACGGCGTGCACTCAGCCGCG
GCGACGTCGCGCCACCCGGCGTACTCGTGGATCCCAGCGTCGCCGCTTGGATGCTAAGAAACGGCGTGGTGAGCTCAAGA
GGAATCGTCAACGTCCGACGTGGTGA

Upstream 100 bases:

>100_bases
ACTATTCGATGGTGACTGATCGGATCAGTGGACTGGAAGTCCGTGACACCTCTCATGTTGAATAGTTGAATGCCAGGCCT
GGATCAGAGGGGGAGACATG

Downstream 100 bases:

>100_bases
CGAGGATTTGTCTCCCGCAGTGCAATGCTCGTTGTGGAGGGGCAGTGTGAGGGGAAAGTTCCAGGCACCATCGTGCGGTG
TCTCCTTCTGCAAAATGACA

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRPVIMSVLKNRLVDGVLTVTVHD
ERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQRRRLDAKKRRGELKRNRQRPTW

Sequences:

>Translated_141_residues
MKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRPVIMSVLKNRLVDGVLTVTVHD
ERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQRRRLDAKKRRGELKRNRQRPTW
>Mature_141_residues
MKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRPVIMSVLKNRLVDGVLTVTVHD
ERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQRRRLDAKKRRGELKRNRQRPTW

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=112, Percent_Identity=34.8214285714286, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16037; Mature: 16037

Theoretical pI: Translated: 12.31; Mature: 12.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRPV
CCCCCEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
IMSVLKNRLVDGVLTVTVHDERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQR
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
RRLDAKKRRGELKRNRQRPTW
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKVGDIEVVPGFIIAETDLRERFSHSSGPGGQGVNTTDSRVELMFDVARSGAVPDRLRPV
CCCCCEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
IMSVLKNRLVDGVLTVTVHDERSQLANRKLARARLVGLLQTACTQPRRRRATRRTRGSQR
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
RRLDAKKRRGELKRNRQRPTW
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]