Click here to switch to the map view.

The map label for this gene is 50842709

Identifier: 50842709

GI number: 50842709

Start: 1337537

End: 1337956

Strand: Reverse

Name: 50842709

Synonym: PPA1229

Alternate gene names: NA

Gene position: 1337956-1337537 (Counterclockwise)

Preceding gene: 50842710

Following gene: 50842708

Centisome position: 52.26

GC content: 57.86

Gene sequence:

>420_bases
ATGGCAATTGATACTGTCGATGAACCCGATGTCGAACTCGGTGACCTCACCCGTCTGGCGGCCGTCTTCAAAAGTCTCGG
GGACCCTCACCGGCTCGTCATCGTCCAGCACCTGTTCCGTGGTGAACACCGCGTCACTGATCTGGTCGCTCATCTAGGGC
TGGCTCAGTCGACGGTTTCTTCCCACGTCGCCACGCTGCGAGACGCCGGCCTGTTGGCAAGTCACGCTCATGGCCGGGCG
ATGTATTACACGTTGGCGCACCCACAACAAATTCGTCGTTTGATGCTGTTGGCTGACATTCTGATAAGAGACGGCGGGGA
GTGCGCTGAGCTATGCGGCATGCTCGATGTTGAGTACCGTGGAGAACCCAGCGATGACCACATCGGCGGCAATGACGACG
CAGTGAGGGAAGAATATTGA

Upstream 100 bases:

>100_bases
GAGCCGTGTGATGAGGCGAAGTCATGACCGGGATCGATAGTTACGGTAGAAGCCGGCACGCGGGTATGTTGATATCGCCA
TTTAGCGATATCATCGCCAT

Downstream 100 bases:

>100_bases
GCAATCACAGGCATGATCATTCTCTACCCTCGGACGCGGACTCCCGATACCTCGTTGCTGCGCTTACACTCCTGGCGGCG
TTCATGATCACGGAGATCAT

Product: putative transcription regulator

Products: NA

Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator ArsR Family; Regulatory Protein Arsr; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator ArsR; Transcription Regulator

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVSSHVATLRDAGLLASHAHGRA
MYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYRGEPSDDHIGGNDDAVREEY

Sequences:

>Translated_139_residues
MAIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVSSHVATLRDAGLLASHAHGRA
MYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYRGEPSDDHIGGNDDAVREEY
>Mature_138_residues
AIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVSSHVATLRDAGLLASHAHGRAM
YYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYRGEPSDDHIGGNDDAVREEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15294; Mature: 15162

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVS
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SHVATLRDAGLLASHAHGRAMYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYR
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC
GEPSDDHIGGNDDAVREEY
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIDTVDEPDVELGDLTRLAAVFKSLGDPHRLVIVQHLFRGEHRVTDLVAHLGLAQSTVS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SHVATLRDAGLLASHAHGRAMYYTLAHPQQIRRLMLLADILIRDGGECAELCGMLDVEYR
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC
GEPSDDHIGGNDDAVREEY
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA