| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is gmk
Identifier: 50842670
GI number: 50842670
Start: 1296314
End: 1296913
Strand: Direct
Name: gmk
Synonym: PPA1190
Alternate gene names: 50842670
Gene position: 1296314-1296913 (Clockwise)
Preceding gene: 50842669
Following gene: 50842671
Centisome position: 50.63
GC content: 60.33
Gene sequence:
>600_bases ATGAGTAGCGTCCCCGTCATCCCTCAGGCCCGAGGGCTTCGTCACACCGGCCCGGTCACCGTGGCTGTCGTCTCCGGACC TACCGCAGTTGGTAAAGGGACCGTGGTAGGGGCGCTGCTGCGTAGCCATCCGGAGATCGTCGTTTCCAGGTCGGTGACTA CCCGTCCGCCGCGCCCCACTGAACGCGATGGGATCGATTACGACTTCATCACCCCTGAGCAGTTCGACAAGCTCGTTGAC GGCGAGGGTCTCCTTGAGTGGGCAACCGTCCATAACAGCCACCGGTACGGCACACCGCGCGGTCCTGTTGAACGGGCAGT TGCTGACAATCGCACGGTCGTGCTGGAAATCGATCTGCAGGGAGCTCGCCAAGTTCGCGAAACCTATCCTCAGGCGACCC AGATCTTCCTCGCGCCACCCTCATGGGAGGAGCTAGTCCACCGTCTGATCGGTCGCGGCACGGAAACACCAGAGCAACAG AAGCAGCGTCTGGAGACTGCAAAGGTTGAGCTGGCCAACGCGGATGAATTTGACGCCGTTGTCGTCAACGACACCGTAGA TCACGCAGTTGCGCATCTGGTAGAATTACTAAGTCTGTGA
Upstream 100 bases:
>100_bases CCATCAGATTGCCGGGCTACGCGCTGAGTTTGACCAACGCTCTTAAAGATGACGCGCGCCTCGGCGCAACTGTGTCGCTA TGGACCATTAAGGTGTTCCT
Downstream 100 bases:
>100_bases CCATATCTGGAGGACATTCCTTGACTGAGACCACCCCTGAAGGCATCGTCAACCCGCCCATTGACCAGCTCCTCGAGCAC GTCGACTCGAAGTACCGCCT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPTERDGIDYDFITPEQFDKLVD GEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQGARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQ KQRLETAKVELANADEFDAVVVNDTVDHAVAHLVELLSL
Sequences:
>Translated_199_residues MSSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPTERDGIDYDFITPEQFDKLVD GEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQGARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQ KQRLETAKVELANADEFDAVVVNDTVDHAVAHLVELLSL >Mature_198_residues SSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPTERDGIDYDFITPEQFDKLVDG EGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQGARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQK QRLETAKVELANADEFDAVVVNDTVDHAVAHLVELLSL
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=187, Percent_Identity=39.572192513369, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI4504221, Length=187, Percent_Identity=39.572192513369, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI226874831, Length=187, Percent_Identity=39.572192513369, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI262118255, Length=174, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI4505237, Length=174, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI262118263, Length=176, Percent_Identity=28.4090909090909, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI262118259, Length=174, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=8e-14, Organism=Escherichia coli, GI1790080, Length=176, Percent_Identity=39.2045454545455, Blast_Score=126, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17508835, Length=195, Percent_Identity=32.8205128205128, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193203132, Length=185, Percent_Identity=34.0540540540541, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6320662, Length=180, Percent_Identity=37.7777777777778, Blast_Score=125, Evalue=4e-30, Organism=Drosophila melanogaster, GI21356141, Length=171, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_PROAC (Q6A8H6)
Other databases:
- EMBL: AE017283 - RefSeq: YP_055897.1 - ProteinModelPortal: Q6A8H6 - SMR: Q6A8H6 - GeneID: 2933186 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1190 - NMPDR: fig|267747.1.peg.1174 - HOGENOM: HBG671982 - OMA: EWAEFAG - ProtClustDB: CLSK2763801 - BioCyc: PACN267747:PPA1190-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 21801; Mature: 21670
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPT CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC ERDGIDYDFITPEQFDKLVDGEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQ CCCCCCCCCCCHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEECC GARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQKQRLETAKVELANADEFDAV CHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCEE VVNDTVDHAVAHLVELLSL EECCHHHHHHHHHHHHHCC >Mature Secondary Structure SSVPVIPQARGLRHTGPVTVAVVSGPTAVGKGTVVGALLRSHPEIVVSRSVTTRPPRPT CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC ERDGIDYDFITPEQFDKLVDGEGLLEWATVHNSHRYGTPRGPVERAVADNRTVVLEIDLQ CCCCCCCCCCCHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEECC GARQVRETYPQATQIFLAPPSWEELVHRLIGRGTETPEQQKQRLETAKVELANADEFDAV CHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCEE VVNDTVDHAVAHLVELLSL EECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA