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The map label for this gene is licB [H]

Identifier: 50842626

GI number: 50842626

Start: 1246671

End: 1246982

Strand: Direct

Name: licB [H]

Synonym: PPA1147

Alternate gene names: 50842626

Gene position: 1246671-1246982 (Clockwise)

Preceding gene: 50842625

Following gene: 50842627

Centisome position: 48.69

GC content: 52.88

Gene sequence:

>312_bases
ATGTCTAATGTTTTACTGGTTTGCTCTGGTGGTATGTCGAGTGGGGTCGTTCTCAAGAATTTGGAGAAGGAATTCCAGAA
GCTGGGCGAGCCGCTCCAGGCTAAGGCTGTCGGGTCAGGGCAGGCGCAGGACGAAATATCGACAGGGGAATGGGATCTCG
TTTTGGTCGCTCCCCAGGTGCGAAATAGATTGAAGACTTTTCAACAGTACGTCGATCGACGTGGGATCCCGATTTGCGCG
ATTCCTCCGGTTGCCTACGGTCCGCTTGGCGGTTCAGAACTGGTAAAGACTGTCAAAGAACATCTCGGGTGA

Upstream 100 bases:

>100_bases
GCGGGGAACTTATAAACGGTTGCCGAAAGATAGTTTCTATTGGTATCGCGACTTCATCGCCTCTCATAGGTGATTGATAC
ACAATCAAGGAGGATTGGTC

Downstream 100 bases:

>100_bases
TCGCCATGGAGAAGTTCTTTAACTTCTTGGATAGGAGAGTGGCTGCTCCGATGTCGATGATATCGGAGCAGCGACATATC
CGGGCTATTCGCGACGGTGT

Product: PTS system, lichenan-specific IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSNVLLVCSGGMSSGVVLKNLEKEFQKLGEPLQAKAVGSGQAQDEISTGEWDLVLVAPQVRNRLKTFQQYVDRRGIPICA
IPPVAYGPLGGSELVKTVKEHLG

Sequences:

>Translated_103_residues
MSNVLLVCSGGMSSGVVLKNLEKEFQKLGEPLQAKAVGSGQAQDEISTGEWDLVLVAPQVRNRLKTFQQYVDRRGIPICA
IPPVAYGPLGGSELVKTVKEHLG
>Mature_102_residues
SNVLLVCSGGMSSGVVLKNLEKEFQKLGEPLQAKAVGSGQAQDEISTGEWDLVLVAPQVRNRLKTFQQYVDRRGIPICAI
PPVAYGPLGGSELVKTVKEHLG

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11048; Mature: 10917

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVLLVCSGGMSSGVVLKNLEKEFQKLGEPLQAKAVGSGQAQDEISTGEWDLVLVAPQV
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEEECHHH
RNRLKTFQQYVDRRGIPICAIPPVAYGPLGGSELVKTVKEHLG
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SNVLLVCSGGMSSGVVLKNLEKEFQKLGEPLQAKAVGSGQAQDEISTGEWDLVLVAPQV
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEEECHHH
RNRLKTFQQYVDRRGIPICAIPPVAYGPLGGSELVKTVKEHLG
HHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]