| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842624
Identifier: 50842624
GI number: 50842624
Start: 1244212
End: 1245216
Strand: Direct
Name: 50842624
Synonym: PPA1145
Alternate gene names: NA
Gene position: 1244212-1245216 (Clockwise)
Preceding gene: 50842623
Following gene: 50842625
Centisome position: 48.6
GC content: 55.72
Gene sequence:
>1005_bases ATGGATACTGGCAGGTTAATCACTCGCAGGACCGTAATGTCGGCAACGTGCGTCGCGACGGTGGCCGCGATGATGAGTCC TGCTCCCACAGCAGAGGCTAAGGCCGACCTAGCAAGGCCGAGGGTCATGTGGCAGCAGTGTGTTGAGCGCGCGTTACAGT GCTTTCCTACTGGCGGCGGCTACCACACCGGCAGAAATATTCCGCCTGGCTTTCGACAAACCGCGTGGACAGGATTGGAC CGTGCGGTTCGGGTCACGGCGACTGGCGTTTGCGTGGACCCTTACCTTGCGACGCCGTCGTTTTGCTCCTCAGCCACCTA TCTTCTGCTGTTAAAGAGCCTTGAACTATACGAGAAAACCTGCGGCGTCATGCCGCCCAGGCAGGAGTGGGAATACCTGA AGCCTTACACGGTGGACAACAGGCCCTACCCGATCCAGAACGATGGAGTCGGAGCGTGGGGGCGTGCAAATGCCAACGGA CCGGGCGTGGCTGAATTGGCCCATGAATTGAAAATTGGTACCAACCTGTATATCGGTACTACGGGCGAATATGCGGACCC CGGAGATCGCAACGAGATGTTCGCGAGTATCCGCAGGTACGATTTCATGAAAATATTCTGGAATGACGAAATCGGAAAGG ATGAACGTGGCCACATGGTGGTTGTCTTAGGGCGGTCGAGTCACAGTAACTGTTCCAGACATAGGGTGGGAACTGTGCGC TATTGGTCATCCAATGGATCGCACACCGACATCAATGGCGGTTATGGAATTAAGTGTGTCTCCGAAGACAAGATCCATCG CGCTGTCGTAACGCGAGTCGACCGACCTTGGAACGTGTGGAACACCGAGGTGATGGGCCCCACTGACGTCTGTGTGCCGT TGGCAGGAATTGCTGCCGACAGGAATATGACTCCGGACGAGTTGAAGCAGTTGGTCGAGGCTAAGAGTTGTTGGCCTAGA CGGTTTAGCGGATCGCACGGTGTTCATGAGAGGTATGTGAGATGA
Upstream 100 bases:
>100_bases GGGCATGCTGGGCGGCCGGGCGCTTACGAGGTGTCGAGCTGCACAACGTCGATATGATGAATGCATTAGAGATTTGTTCG GATTCCAGGAGACGATGATA
Downstream 100 bases:
>100_bases AGCGCATTCTGTGGGGTGGGGCTACCGCGGCCAGTCAATATGAAGGCGGATTCTACGATGGAAAGGGAATGGACACCCAA GACTGTCGTCGATGGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDTGRLITRRTVMSATCVATVAAMMSPAPTAEAKADLARPRVMWQQCVERALQCFPTGGGYHTGRNIPPGFRQTAWTGLD RAVRVTATGVCVDPYLATPSFCSSATYLLLLKSLELYEKTCGVMPPRQEWEYLKPYTVDNRPYPIQNDGVGAWGRANANG PGVAELAHELKIGTNLYIGTTGEYADPGDRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVVLGRSSHSNCSRHRVGTVR YWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNTEVMGPTDVCVPLAGIAADRNMTPDELKQLVEAKSCWPR RFSGSHGVHERYVR
Sequences:
>Translated_334_residues MDTGRLITRRTVMSATCVATVAAMMSPAPTAEAKADLARPRVMWQQCVERALQCFPTGGGYHTGRNIPPGFRQTAWTGLD RAVRVTATGVCVDPYLATPSFCSSATYLLLLKSLELYEKTCGVMPPRQEWEYLKPYTVDNRPYPIQNDGVGAWGRANANG PGVAELAHELKIGTNLYIGTTGEYADPGDRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVVLGRSSHSNCSRHRVGTVR YWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNTEVMGPTDVCVPLAGIAADRNMTPDELKQLVEAKSCWPR RFSGSHGVHERYVR >Mature_334_residues MDTGRLITRRTVMSATCVATVAAMMSPAPTAEAKADLARPRVMWQQCVERALQCFPTGGGYHTGRNIPPGFRQTAWTGLD RAVRVTATGVCVDPYLATPSFCSSATYLLLLKSLELYEKTCGVMPPRQEWEYLKPYTVDNRPYPIQNDGVGAWGRANANG PGVAELAHELKIGTNLYIGTTGEYADPGDRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVVLGRSSHSNCSRHRVGTVR YWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNTEVMGPTDVCVPLAGIAADRNMTPDELKQLVEAKSCWPR RFSGSHGVHERYVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37191; Mature: 37191
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGRLITRRTVMSATCVATVAAMMSPAPTAEAKADLARPRVMWQQCVERALQCFPTGGG CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YHTGRNIPPGFRQTAWTGLDRAVRVTATGVCVDPYLATPSFCSSATYLLLLKSLELYEKT CCCCCCCCCCHHHHHHHCCCCEEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH CGVMPPRQEWEYLKPYTVDNRPYPIQNDGVGAWGRANANGPGVAELAHELKIGTNLYIGT HCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC TGEYADPGDRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVVLGRSSHSNCSRHRVGTVR CCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHCCEEEE YWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNTEVMGPTDVCVPLAGIAAD EECCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC RNMTPDELKQLVEAKSCWPRRFSGSHGVHERYVR CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MDTGRLITRRTVMSATCVATVAAMMSPAPTAEAKADLARPRVMWQQCVERALQCFPTGGG CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YHTGRNIPPGFRQTAWTGLDRAVRVTATGVCVDPYLATPSFCSSATYLLLLKSLELYEKT CCCCCCCCCCHHHHHHHCCCCEEEEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH CGVMPPRQEWEYLKPYTVDNRPYPIQNDGVGAWGRANANGPGVAELAHELKIGTNLYIGT HCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC TGEYADPGDRNEMFASIRRYDFMKIFWNDEIGKDERGHMVVVLGRSSHSNCSRHRVGTVR CCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHCCEEEE YWSSNGSHTDINGGYGIKCVSEDKIHRAVVTRVDRPWNVWNTEVMGPTDVCVPLAGIAAD EECCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC RNMTPDELKQLVEAKSCWPRRFSGSHGVHERYVR CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA