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The map label for this gene is 50842559

Identifier: 50842559

GI number: 50842559

Start: 1176048

End: 1176380

Strand: Direct

Name: 50842559

Synonym: PPA1081

Alternate gene names: NA

Gene position: 1176048-1176380 (Clockwise)

Preceding gene: 50842558

Following gene: 50842560

Centisome position: 45.93

GC content: 55.56

Gene sequence:

>333_bases
ATGATTGCGCTCATCGGCCTGGTGGTCGGGATCATTATCGGTATCGTGGTTAACCCGACTCTACCTCCCGGTTTGCAGCC
GTATCTGCCGATCATGATCGTCGCTGCTCTGGACGCCATCTTTGGTGCGGTGCGTGCCTATTTAGCCCATACCTTCTCGG
ATCGTGTCTTTGTCGTCTCATTCTTGTCCAACGTTGCCATTGCGGCTCTCATCGTTTGGGTGGGAGACCAGATTGGCGTG
GGATCGCAACTGTCGACCGCTGTCGTCGTCGTTTTAGGCATCCGCATCTTTACTAATGCTGCCGCCATCCGGCGTGAGGT
GCTTCATGCCTGA

Upstream 100 bases:

>100_bases
TCGGGTCTCAGTTCCAGGATCGAAGGCATCGGTGAGTCACGCGAGGCCTCATCGTTGACAATGAGACGATGAACGGCAAT
GGCACATAGGAAGGACACCC

Downstream 100 bases:

>100_bases
TCATCACGATCGACGGGAGTGGGCCGAGAATCACTGGCGCAAGATCGGCAAGGATCTGGCCTCGGTGTCTACTGGCCAGA
TCCTTGTCGCCATCATCTTG

Product: small basic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVSFLSNVAIAALIVWVGDQIGV
GSQLSTAVVVVLGIRIFTNAAAIRREVLHA

Sequences:

>Translated_110_residues
MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVSFLSNVAIAALIVWVGDQIGV
GSQLSTAVVVVLGIRIFTNAAAIRREVLHA
>Mature_110_residues
MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVSFLSNVAIAALIVWVGDQIGV
GSQLSTAVVVVLGIRIFTNAAAIRREVLHA

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 11530; Mature: 11530

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVS
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLSNVAIAALIVWVGDQIGVGSQLSTAVVVVLGIRIFTNAAAIRREVLHA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIALIGLVVGIIIGIVVNPTLPPGLQPYLPIMIVAALDAIFGAVRAYLAHTFSDRVFVVS
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLSNVAIAALIVWVGDQIGVGSQLSTAVVVVLGIRIFTNAAAIRREVLHA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]