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The map label for this gene is 50842497

Identifier: 50842497

GI number: 50842497

Start: 1096975

End: 1098603

Strand: Direct

Name: 50842497

Synonym: PPA1014

Alternate gene names: NA

Gene position: 1096975-1098603 (Clockwise)

Preceding gene: 50842496

Following gene: 50842499

Centisome position: 42.85

GC content: 59.67

Gene sequence:

>1629_bases
ATGCTCATCGCACTCATCGCAGTATCGGTGCTCGCAGTAGCAGCTATTATCGGCTCGCTGGCAGACCGTCGAGCCATTGG
CAGGAGGGCGGAGCGAGCGGAGTCAGAGCGCGACGTCAAGGCCTTGGAACTCTCCCGAAGTCAAGAACGGTTGTCCCGGG
CAAGTCAAGATCTCGCCGATAGCCGCAAGGATGTCGCTAAGGCTCGAGCGGAGCTCGAGTCCAGCCGCACCCGGGCCTCC
GATGAAGCTCGCCGTGCCGACAATGCTGATCAAGCCCGGCGTAGCGCCGAGGCTCTCTTAGAGATTAATCGTCGCTCCGT
TGAAGAACTGACCGAACGCGATCACCGGCTGCAAGAAGCTCGCCGCCATCTCGAAGAGGGGCTCGACAAGATCGAGCAGG
ACCGGTTGGAGCTAGCCGAACGTAGTTCACAACTTGATGAGCGTGATGCCGAGCTTGATCGACGTCATGGTCAGATCGTT
ACCGAATTGGAACGGGTCGCCGGGATGTCCCTCGATGAGGCCCGCGATGAGCTCGTTGAGCATCTGGGACGGGAGGCTCG
CGTCTTCGCCGAAAACAGTGCCCGTGCCATCGTCACCGAGGCGACGGCGTCGGCTGAGGCTAAGGCTCGCCATATCGTGG
CGGAGGTTATCCAGCGGTGTTCCTCCGAGATGGTTGCTGACACCGTCGTCAGTGTCGTGCCGTTGCCTAGCAACGAGATG
AAAGGCCGAGTCATTGGTCGAGAGGGTCGCAATATTCGCACCTTTGAGCAAGTCACTGGTGTGACCGTCATCATTGATGA
CACCCCGGAGATCGTGCTATTGAGTTGCTTCGATCCAATGCGCCGTGAGGTGGCTCGGCAGGCTCTCACCGATTTGGTCG
AGGACGGGCGAATTCACCCCATCAGTATCGAAAGAGCCCATCAACGAGCGGTCGACCGCATCGAGGACATGTGCCTGGAT
GCTGCCGCTGACGCTCTGTCGAGGGCGGGAATTGACGATATTGACGACCGTCTGCTGCCGATCCTCGGCTCATTGAGATT
CCGAACCTCCTATGGTCAGCAGGTGCTAGATCACTGCGTTGAGTGCGCTCGGCTGGCAGCCAACCTGGCTGCCGAAATTG
GGGCTGATATCGAGATCTGTCGTCGGGCTGCGTTTTTACACGACCTCGGCAAATCCCTCACTCCAGGTGTCGAGGGAAGT
AGTCATGCTGCTATTGGTGCCGAGCTAGCACGTCGTTATGGTGAATCGGAGGAGGTTATTCACGCTATCGCCGCTCATCA
CGACGAGATTGATCCGGTGAGTGTCACTGACTTCATCGTCAAGGCCGCGGATGCTATCTCTGCTGCTCGGCCTGGGGCTC
GACGTGAGTCCCTCGAAGCCCACGTTCGGCGGATGGACACCATCGAAGAGATAGCTACCAGCTTTCCCGGGGTCGTGCGC
GCGTTTGCGCTGCAAGCAGGGCGTGAGATGCAGATTCTTGTCGACCCGGGCGCCGTCGACGATCACCAAGCCTCGCGCCT
TGCCCGCCAGATCGCCCTTGCAATAGGGGAGCAGGTCACTGTTCCCGGACGGACCCGGGTTACTGTGATCCGTTCGTTCC
AGGCAATAGAGACCGTCGGGGACGCGTGA

Upstream 100 bases:

>100_bases
CATATCGTTTACCGCTTGCCTCGTGTCTGACGGTCCTCGTACCGGGCACGATGAGGGCGACGATGCAGATCCGAGTCAGG
ATGTGAGAGAGGACAGGGCC

Downstream 100 bases:

>100_bases
ATCCTGCCCTCCCGTCCTTGTCCTTTCGAGCTTCCGCGGGTCAGGCGATGCCCCAGTGCAGTGTGACGTCATTACCGGGC
TCTAGTCGAATGACGTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLADSRKDVAKARAELESSRTRAS
DEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEARRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIV
TELERVAGMSLDEARDELVEHLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHPISIERAHQRAVDRIEDMCLD
AAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCVECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGS
SHAAIGAELARRYGESEEVIHAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR
AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVGDA

Sequences:

>Translated_542_residues
MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLADSRKDVAKARAELESSRTRAS
DEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEARRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIV
TELERVAGMSLDEARDELVEHLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHPISIERAHQRAVDRIEDMCLD
AAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCVECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGS
SHAAIGAELARRYGESEEVIHAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR
AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVGDA
>Mature_542_residues
MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLADSRKDVAKARAELESSRTRAS
DEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEARRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIV
TELERVAGMSLDEARDELVEHLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHPISIERAHQRAVDRIEDMCLD
AAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCVECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGS
SHAAIGAELARRYGESEEVIHAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR
AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVGDA

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_PROAC (Q6A900)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_055724.1
- ProteinModelPortal:   Q6A900
- SMR:   Q6A900
- GeneID:   2932113
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1014
- NMPDR:   fig|267747.1.peg.1001
- HOGENOM:   HBG734610
- OMA:   NEVAPRS
- ProtClustDB:   CLSK2763670
- BioCyc:   PACN267747:PPA1014-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 59586; Mature: 59586

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12735584)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKDVAKARAELESSRTRASDEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEA
HHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIVTELERVAGMSLDEARDELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
HCCCHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHP
CCCEECCCCCCCHHHHHHCCEEEEECCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCC
ISIERAHQRAVDRIEDMCLDAAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGSSHAAIGAELARRYGESEEVI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVG
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHC
DA
CH
>Mature Secondary Structure
MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKDVAKARAELESSRTRASDEARRADNADQARRSAEALLEINRRSVEELTERDHRLQEA
HHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIVTELERVAGMSLDEARDELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
HCCCHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHP
CCCEECCCCCCCHHHHHHCCEEEEECCCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCC
ISIERAHQRAVDRIEDMCLDAAADALSRAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECARLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGSSHAAIGAELARRYGESEEVI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEIATSFPGVVR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
AFALQAGREMQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVG
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHC
DA
CH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA