Click here to switch to the map view.

The map label for this gene is recA

Identifier: 50842495

GI number: 50842495

Start: 1095280

End: 1096326

Strand: Direct

Name: recA

Synonym: PPA1012

Alternate gene names: 50842495

Gene position: 1095280-1096326 (Clockwise)

Preceding gene: 50842494

Following gene: 50842496

Centisome position: 42.78

GC content: 58.64

Gene sequence:

>1047_bases
ATGGCAGCGACCGCTGACCGCGAAAAGGCCCTTGCCACGGCCTTGCAGCAGATCGAGAAGCAGCACGGCAAGGGCTCTAT
CATGCGCCTTGGCGAGCAGGAGACCGTTAAGATCGCCGCTATCCCCACGGGCTCGGTGGCCCTCGACGTCGCGTTGGGTG
TCGGAGGCCTCCCACGTGGCAGAATCGTGGAGATCTATGGTCCCGAATCCTCCGGCAAGACGACGGTGGCTTTGCACGCA
ATCGCTAATGCCCAGGCTGAAGGCGGCATCTGTGCCTTTATTGACGCCGAGCACGCTCTCGACCCGGAATACGCACGCAA
ACTCGGGGTCGATACAGATTCCCTGCTGGTGAGCCAGCCTGACAATGGTGAGCAGGCTCTCGAGATTGCTGACACCCTCG
TCCGCTCGGGTGCCTTGGAGCTCATCGTTGTTGACTCGGTGGCCGCTCTGACCCCGAAGGCTGAGATCGAGGGCGAGATG
GGTGATTCCCATGTTGGTTTGCAGGCCCGCCTTATGAGCCAGGCCCTGCGCAAGATGACCGGTGCGTTGAATGCGGCCGG
TACCACTGCCATCTTCATTAATCAGCTGCGCGAGAAGATCGGTGTCATGTTTGGCTCCCCGGAGACAACGACAGGTGGTC
GCGCCCTCAAGTTCTACTCGTCCGTGCGCCTCGACGTGCGGCGTGTCGAAACTCTTAAAGACGGATCAGAGATGGTCGGT
AACCGCACTCGTGTCAAGGTTGCCAAGAACAAGGTCGCCCCACCTTTTAAGCAGGCAGAGTTTGACATCCTTTACGGACA
GGGCATTTCTCGCGAGGGAAGCCTCATCGACATGGGCGTAGATTGCGGCATCATCACCAAATCCGGTTCGTGGTTCAGCT
ACAACAATGAGCAGTTAGGTCAGGGTAAGGAGAACGTCCGAAAGTTCCTCAGAGGTAACCCGGATGTTGCCAATGAGATT
GAGGACAAGATCCTGACTCACCTTGGCCTGCGCGAAGCCGAGGTCCCTGAAGGTGTCGATCCCCGAACTGGCGAGGTGGA
ATTCTGA

Upstream 100 bases:

>100_bases
AGGGAGCTCGGTGGGGTTCTCTCATCGCCACATATGATCAACGTCGCGGCGGTGCCGCGCGTCAAATGGGGCGGGAGACC
GCCTTCGAGGAAGGAACGAC

Downstream 100 bases:

>100_bases
GTCGCCGACGCCAGGATCTGCAGCCAGAATTGACTGATGACCAGTGGTATGAGGAAGCTCGGGAGATCTGCCTCAAGCGA
CTGGATCGTCGGGCTAATAC

Product: RecA protein

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MAATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRGRIVEIYGPESSGKTTVALHA
IANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQPDNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEM
GDSHVGLQARLMSQALRKMTGALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG
NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLGQGKENVRKFLRGNPDVANEI
EDKILTHLGLREAEVPEGVDPRTGEVEF

Sequences:

>Translated_348_residues
MAATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRGRIVEIYGPESSGKTTVALHA
IANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQPDNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEM
GDSHVGLQARLMSQALRKMTGALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG
NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLGQGKENVRKFLRGNPDVANEI
EDKILTHLGLREAEVPEGVDPRTGEVEF
>Mature_347_residues
AATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRGRIVEIYGPESSGKTTVALHAI
ANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQPDNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKMTGALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVGN
RTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLGQGKENVRKFLRGNPDVANEIE
DKILTHLGLREAEVPEGVDPRTGEVEF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=324, Percent_Identity=66.9753086419753, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_PROAC (Q6A902)

Other databases:

- EMBL:   AY642055
- EMBL:   AY642056
- EMBL:   AY642059
- EMBL:   AY642060
- EMBL:   AY642063
- EMBL:   AY642068
- EMBL:   AY642070
- EMBL:   AY642071
- EMBL:   AY642072
- EMBL:   AY642073
- EMBL:   AY642074
- EMBL:   AY642075
- EMBL:   AY642076
- EMBL:   AY642077
- EMBL:   AY642078
- EMBL:   AY642079
- EMBL:   AY642080
- EMBL:   AY642081
- EMBL:   AY642082
- EMBL:   AY642086
- EMBL:   AY642092
- EMBL:   AY642093
- EMBL:   AY642094
- EMBL:   AY642095
- EMBL:   AY642096
- EMBL:   AY642097
- EMBL:   AE017283
- RefSeq:   YP_055722.1
- ProteinModelPortal:   Q6A902
- SMR:   Q6A902
- GeneID:   2931890
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1012
- NMPDR:   fig|267747.1.peg.999
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   CLSK2763668
- BioCyc:   PACN267747:PPA1012-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37154; Mature: 37023

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRG
CCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQP
CEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHEEEECC
DNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKMT
CCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG
HHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHC
NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLG
CCEEEEEECCCCCCCHHCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEECCHHHC
QGKENVRKFLRGNPDVANEIEDKILTHLGLREAEVPEGVDPRTGEVEF
CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AATADREKALATALQQIEKQHGKGSIMRLGEQETVKIAAIPTGSVALDVALGVGGLPRG
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCC
RIVEIYGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPEYARKLGVDTDSLLVSQP
CEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHEEEECC
DNGEQALEIADTLVRSGALELIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKMT
CCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GALNAAGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRVETLKDGSEMVG
HHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHC
NRTRVKVAKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCGIITKSGSWFSYNNEQLG
CCEEEEEECCCCCCCHHCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEECCHHHC
QGKENVRKFLRGNPDVANEIEDKILTHLGLREAEVPEGVDPRTGEVEF
CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA