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The map label for this gene is 50842492

Identifier: 50842492

GI number: 50842492

Start: 1093244

End: 1093519

Strand: Direct

Name: 50842492

Synonym: PPA1009

Alternate gene names: NA

Gene position: 1093244-1093519 (Clockwise)

Preceding gene: 50842491

Following gene: 50842494

Centisome position: 42.7

GC content: 56.88

Gene sequence:

>276_bases
ATGAAATCAACTCTGTTGCGTGAAATGCTCGGCGAGTCTCTGCGGGAGCAGAGGTTCGCACAGGGGCGAACCTTGCGTGA
GGTGTCTTCTGCCGCACGCGTGTCCCTTGGATACCTGTCGGAGGTGGAGCGAGGCCAGAAAGAAGCTTCTAGCGAGCTTA
TCTCGGCCATCTGCACTGCTCTGGATCTTCCCCAGTCCGATCTCATGCGCATTGTCAGTGACAAGATGCTCAAGAACGAA
GACGCCCCGGAACACCGCATCACTGTTGCGGCTTGA

Upstream 100 bases:

>100_bases
GACGCGCACCTCAAGCAAGAAGTGAAAAATTCCGCGGTGTGGGGAATGTTTCATGAAGGCGATGCGTTGTCATGGATGAA
CCACCTGGGAGGAGATACCC

Downstream 100 bases:

>100_bases
ACGTACCAAGCTTGTCAGGTTCCCGGTCCCGGGACCGGGAACGTCTACATTTAGGACGAGACAGCGGATAGTTAGCGCGC
TAGCGGGTGGCCGAGGGACC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Protein; HTH_3 Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator ClgR; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix XRE-Family Like Proteins

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTALDLPQSDLMRIVSDKMLKNE
DAPEHRITVAA

Sequences:

>Translated_91_residues
MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTALDLPQSDLMRIVSDKMLKNE
DAPEHRITVAA
>Mature_91_residues
MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTALDLPQSDLMRIVSDKMLKNE
DAPEHRITVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10121; Mature: 10121

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLPQSDLMRIVSDKMLKNEDAPEHRITVAA
HCCCHHHHHHHHHHHHHCCCCCCCCCEECCC
>Mature Secondary Structure
MKSTLLREMLGESLREQRFAQGRTLREVSSAARVSLGYLSEVERGQKEASSELISAICTA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLPQSDLMRIVSDKMLKNEDAPEHRITVAA
HCCCHHHHHHHHHHHHHCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA