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The map label for this gene is 50842356

Identifier: 50842356

GI number: 50842356

Start: 947633

End: 948139

Strand: Reverse

Name: 50842356

Synonym: PPA0869

Alternate gene names: NA

Gene position: 948139-947633 (Counterclockwise)

Preceding gene: 50842357

Following gene: 50842355

Centisome position: 37.03

GC content: 54.44

Gene sequence:

>507_bases
GTGCAGAATTTCCCTACTGTTGGTCTCATCGATGGCACATTCCGCGCAAACCTCGAGGAAACTGGCATGGGGTACGGTTT
GGAGATCGACATGATCAAAATTGCCCACGATCTTGATCTCCTCACCTCACCCTATGTTTTCGACGTTGACCAGGCCAAGG
ATATGGCCCGGGCGGGCTCTGACATCCTCGTCCCCCACATGGGTCTGACAACCTCCGGAACCATTGGTGCAAAAACAGCA
CTCACTATCGAGGATGCTGCTGTCAAGGTTCAGGAACTCGCCGACGCCGCCAAATCCGTCAATCCCGACATCCTATGCCT
ATGCCATGGCGGCCCCATCGCCAATCCCGAGGATGCGCAATACATTCTCGATCACACCGATGGCATCGTAGGCTTCTACG
GCGCATCTTCCATCGAGCGATTCCCGGCAGAGACTGGCATTAAGAAGCAGACCGAAGATTTCATGGCTTTGAAGCTCAAC
AAGAGTTGTCTGGCTCTTCGGGCCTGA

Upstream 100 bases:

>100_bases
TCGTCAAGCACACCCCAGTTCTTGCCGGAGTTAATGGCACTGATCCCTTCAGAGTGATGCCCCAGTCCTAACCCAGATCA
AAGCCGCGGGGTTCGCCGGA

Downstream 100 bases:

>100_bases
GGTGGGGCAGCTAGTCGGGGCCCGGTGCGGTGAGGGGTCGGGGTTATTCGGCAGGATCAGCAGCGCCCAAACTCGCTGCT
CCAAGAAGACCCCGACTGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MQNFPTVGLIDGTFRANLEETGMGYGLEIDMIKIAHDLDLLTSPYVFDVDQAKDMARAGSDILVPHMGLTTSGTIGAKTA
LTIEDAAVKVQELADAAKSVNPDILCLCHGGPIANPEDAQYILDHTDGIVGFYGASSIERFPAETGIKKQTEDFMALKLN
KSCLALRA

Sequences:

>Translated_168_residues
MQNFPTVGLIDGTFRANLEETGMGYGLEIDMIKIAHDLDLLTSPYVFDVDQAKDMARAGSDILVPHMGLTTSGTIGAKTA
LTIEDAAVKVQELADAAKSVNPDILCLCHGGPIANPEDAQYILDHTDGIVGFYGASSIERFPAETGIKKQTEDFMALKLN
KSCLALRA
>Mature_168_residues
MQNFPTVGLIDGTFRANLEETGMGYGLEIDMIKIAHDLDLLTSPYVFDVDQAKDMARAGSDILVPHMGLTTSGTIGAKTA
LTIEDAAVKVQELADAAKSVNPDILCLCHGGPIANPEDAQYILDHTDGIVGFYGASSIERFPAETGIKKQTEDFMALKLN
KSCLALRA

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 17974; Mature: 17974

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFPTVGLIDGTFRANLEETGMGYGLEIDMIKIAHDLDLLTSPYVFDVDQAKDMARAGS
CCCCCCEEEECCCEECCHHHCCCCCCEEEEEEEEEHHHHHHCCCEEEECHHHHHHHHCCC
DILVPHMGLTTSGTIGAKTALTIEDAAVKVQELADAAKSVNPDILCLCHGGPIANPEDAQ
CEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE
YILDHTDGIVGFYGASSIERFPAETGIKKQTEDFMALKLNKSCLALRA
EEEECCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEECC
>Mature Secondary Structure
MQNFPTVGLIDGTFRANLEETGMGYGLEIDMIKIAHDLDLLTSPYVFDVDQAKDMARAGS
CCCCCCEEEECCCEECCHHHCCCCCCEEEEEEEEEHHHHHHCCCEEEECHHHHHHHHCCC
DILVPHMGLTTSGTIGAKTALTIEDAAVKVQELADAAKSVNPDILCLCHGGPIANPEDAQ
CEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE
YILDHTDGIVGFYGASSIERFPAETGIKKQTEDFMALKLNKSCLALRA
EEEECCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]