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The map label for this gene is traA [H]

Identifier: 50842335

GI number: 50842335

Start: 925604

End: 927295

Strand: Direct

Name: traA [H]

Synonym: PPA0849

Alternate gene names: 50842335

Gene position: 925604-927295 (Clockwise)

Preceding gene: 50842334

Following gene: 50842337

Centisome position: 36.15

GC content: 67.97

Gene sequence:

>1692_bases
ATGGCCGAAGTCGCCTGCCAGACTGTGGGGTGGCGTTTCGCCACCGTTGAGGACCGCGAAGTCATCACCGCGATGGTTGC
CGACGCAGCGGAACAGGCGTCCTTACGCCTGACCCCACCCGAGCTAGCGACCAGCCCGGCGAAGTTCCGCCGCCCGGACG
GCACTAGCGTATTTCGTCCGAAGCACTCCACGGTGTTCTCCTCCGACAGCCTCCTGGCCGCAGAGGACCACCTCCTGCAA
CGGGCCCGCACCGCGACCGGTCCGACTATCGACCTGACCACCGTGGGGACCATCACGAGCAAGGCGGACAGCGAGGGTCG
GGTGCTCGGTCCCGATCAGGCCGCAGCTTTGGCGTCGGTCGCGGTCCCGGGCCGGGTGGTGGATGTGTTGGTGGGGCCGG
CGGGGGCTGGGAAGACTGCAGCGATGAACGCACCGCGCCGGGCGTGGGAGACGGAGCATGGTGCCGGGTCGGTGGTGGGG
TTGGCTCCGTCGGCGGTGGCGGCCCAGGTGCTGGCCGATGATCTGAGGATTGCCACGGAGAACACGGCGAAGTGGTGGAC
CACCCACCAACACACCGGCGTCACTTTCAAGGCTGGTCAGCTGGTCATCATCGACGAAGCTTCCCTCGCTGAGACCCTCT
CTTTGAATCGGATCACGCTGGCTGCTGAGGAGGCGGGGACGAAGGTGCTGCTGGTTGGCGACTATGCCCAGCTCCCGTCC
GTCGATGCCGGTGGTGCGTTCAGCCTGTTGATCCACGACCGCCACGATGCCCCCGAGCTGGTCGATGTCCACCGCTTCAC
CCACGCCTGGGAGAAGACCGCATCCCTGGAGCTGCGGCACGGCCGCACCCCGGTCATCGACACCTACCTGGCACAGGATC
GCATCCACGACGGAGACGCCGAGGCCGTGACCGCTGCCGCTTACACCGCCTGGCGCCACGACCGGCAGCAGGGGTTGGCG
TCAGTACTGATCGCCGAAACCCGCGAGAACGTCACCGCCCTCAACATCCACACCCGCGCTGACCTCATCCTGGACAGCAC
GTTGAAGCCTGGCCCCGAAATCACCCTGTCCGACGGGTCCATGGCAGGCGTGGGTGACACGATCATCACCCGCCGTAACG
ACCGGCGGCTGCGGAACCGGCACGGCTGGGTCCACAACGGCCAAACCTGGACCATCACTGCCGTGCGTGACGATGGGTCG
GTCACGATCCGCCCACCCAGTGCCCGGTTCGGCAACAGCATCGTCCTACCCGCCGACTACGTGGCTGAGCACGTCGACCT
CGGCTACGCCGTCACCGCTCACCGCGCCCAAAGCATCACACCGACACCGCCCACGTCCTCGTCGAACCCACGGCGACGCG
GGAAACCTGTATGTGGCTATGACGCGCGGGCGCGAATCGAACCGGGCCTACGTCATCCTCGACCGTGCCGACGACCACGC
CGCCGGCGCCGTGTGCCGTGTGAACTCGGTCGACAGCCCCGGACGCTGGGTCGCGCGGTCCGTGATGAGTTCGTCGACGT
CGGCAGCGGAGGTAACCAGGCGTGCGTGGCCGGTACGGAGCAGCTCGTGCGCACCACGGCTGGTGACAGGCCCCGGCACC
GCACCGACCTGGCGTCCGAGCTGGTGGGCCTCGGACGCTACCCGAAGCGCCCCCGATCGCGCGCCGGCCTCAACGACCAC
CGTTGCTGCTGA

Upstream 100 bases:

>100_bases
TGCGGGCTGGTGATGTGCCGTTGGATCTGATCGAGGGGTGGGGCGGTCTGTAGTCGAGATGGTCGGTGAGAAGCGTTCGA
CGTGGCGGTGCTGGAACCTG

Downstream 100 bases:

>100_bases
CATTGCCTCCAAGCAGTCGGGAGCGGGCTAGGAGCCGATGCCGCGTCGACACGGATCCGGGAGGAAGCTCGCTGGTCAGC
GCACTCACATCACCCACCCG

Product: transfer protein homolog TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MAEVACQTVGWRFATVEDREVITAMVADAAEQASLRLTPPELATSPAKFRRPDGTSVFRPKHSTVFSSDSLLAAEDHLLQ
RARTATGPTIDLTTVGTITSKADSEGRVLGPDQAAALASVAVPGRVVDVLVGPAGAGKTAAMNAPRRAWETEHGAGSVVG
LAPSAVAAQVLADDLRIATENTAKWWTTHQHTGVTFKAGQLVIIDEASLAETLSLNRITLAAEEAGTKVLLVGDYAQLPS
VDAGGAFSLLIHDRHDAPELVDVHRFTHAWEKTASLELRHGRTPVIDTYLAQDRIHDGDAEAVTAAAYTAWRHDRQQGLA
SVLIAETRENVTALNIHTRADLILDSTLKPGPEITLSDGSMAGVGDTIITRRNDRRLRNRHGWVHNGQTWTITAVRDDGS
VTIRPPSARFGNSIVLPADYVAEHVDLGYAVTAHRAQSITPTPPTSSSNPRRRGKPVCGYDARARIEPGLRHPRPCRRPR
RRRRVPCELGRQPRTLGRAVRDEFVDVGSGGNQACVAGTEQLVRTTAGDRPRHRTDLASELVGLGRYPKRPRSRAGLNDH
RCC

Sequences:

>Translated_563_residues
MAEVACQTVGWRFATVEDREVITAMVADAAEQASLRLTPPELATSPAKFRRPDGTSVFRPKHSTVFSSDSLLAAEDHLLQ
RARTATGPTIDLTTVGTITSKADSEGRVLGPDQAAALASVAVPGRVVDVLVGPAGAGKTAAMNAPRRAWETEHGAGSVVG
LAPSAVAAQVLADDLRIATENTAKWWTTHQHTGVTFKAGQLVIIDEASLAETLSLNRITLAAEEAGTKVLLVGDYAQLPS
VDAGGAFSLLIHDRHDAPELVDVHRFTHAWEKTASLELRHGRTPVIDTYLAQDRIHDGDAEAVTAAAYTAWRHDRQQGLA
SVLIAETRENVTALNIHTRADLILDSTLKPGPEITLSDGSMAGVGDTIITRRNDRRLRNRHGWVHNGQTWTITAVRDDGS
VTIRPPSARFGNSIVLPADYVAEHVDLGYAVTAHRAQSITPTPPTSSSNPRRRGKPVCGYDARARIEPGLRHPRPCRRPR
RRRRVPCELGRQPRTLGRAVRDEFVDVGSGGNQACVAGTEQLVRTTAGDRPRHRTDLASELVGLGRYPKRPRSRAGLNDH
RCC
>Mature_562_residues
AEVACQTVGWRFATVEDREVITAMVADAAEQASLRLTPPELATSPAKFRRPDGTSVFRPKHSTVFSSDSLLAAEDHLLQR
ARTATGPTIDLTTVGTITSKADSEGRVLGPDQAAALASVAVPGRVVDVLVGPAGAGKTAAMNAPRRAWETEHGAGSVVGL
APSAVAAQVLADDLRIATENTAKWWTTHQHTGVTFKAGQLVIIDEASLAETLSLNRITLAAEEAGTKVLLVGDYAQLPSV
DAGGAFSLLIHDRHDAPELVDVHRFTHAWEKTASLELRHGRTPVIDTYLAQDRIHDGDAEAVTAAAYTAWRHDRQQGLAS
VLIAETRENVTALNIHTRADLILDSTLKPGPEITLSDGSMAGVGDTIITRRNDRRLRNRHGWVHNGQTWTITAVRDDGSV
TIRPPSARFGNSIVLPADYVAEHVDLGYAVTAHRAQSITPTPPTSSSNPRRRGKPVCGYDARARIEPGLRHPRPCRRPRR
RRRVPCELGRQPRTLGRAVRDEFVDVGSGGNQACVAGTEQLVRTTAGDRPRHRTDLASELVGLGRYPKRPRSRAGLNDHR
CC

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 60811; Mature: 60680

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVACQTVGWRFATVEDREVITAMVADAAEQASLRLTPPELATSPAKFRRPDGTSVFRP
CCCCEEECCCEEEEEECCHHHHHHHHHHHHHHCEEEECCHHHHCCCHHHCCCCCCCEECC
KHSTVFSSDSLLAAEDHLLQRARTATGPTIDLTTVGTITSKADSEGRVLGPDQAAALASV
CCCEEECCCCEEHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEECCCHHHHHHHH
AVPGRVVDVLVGPAGAGKTAAMNAPRRAWETEHGAGSVVGLAPSAVAAQVLADDLRIATE
CCCCEEEEEEECCCCCCCCHHCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHEEEEC
NTAKWWTTHQHTGVTFKAGQLVIIDEASLAETLSLNRITLAAEEAGTKVLLVGDYAQLPS
CCCEEEEECCCCCEEEECCEEEEEECCHHHHHHCCCEEEEEECCCCCEEEEEECHHHCCC
VDAGGAFSLLIHDRHDAPELVDVHRFTHAWEKTASLELRHGRTPVIDTYLAQDRIHDGDA
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHCCCCCC
EAVTAAAYTAWRHDRQQGLASVLIAETRENVTALNIHTRADLILDSTLKPGPEITLSDGS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCEEECCCC
MAGVGDTIITRRNDRRLRNRHGWVHNGQTWTITAVRDDGSVTIRPPSARFGNSIVLPADY
CCCCCCCEEECCCCHHHHHHCCCEECCCEEEEEEEECCCEEEECCCCCHHCCEEEECHHH
VAEHVDLGYAVTAHRAQSITPTPPTSSSNPRRRGKPVCGYDARARIEPGLRHPRPCRRPR
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCHH
RRRRVPCELGRQPRTLGRAVRDEFVDVGSGGNQACVAGTEQLVRTTAGDRPRHRTDLASE
HHCCCCHHHCCCCHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHH
LVGLGRYPKRPRSRAGLNDHRCC
HHHCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
AEVACQTVGWRFATVEDREVITAMVADAAEQASLRLTPPELATSPAKFRRPDGTSVFRP
CCCEEECCCEEEEEECCHHHHHHHHHHHHHHCEEEECCHHHHCCCHHHCCCCCCCEECC
KHSTVFSSDSLLAAEDHLLQRARTATGPTIDLTTVGTITSKADSEGRVLGPDQAAALASV
CCCEEECCCCEEHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEECCCHHHHHHHH
AVPGRVVDVLVGPAGAGKTAAMNAPRRAWETEHGAGSVVGLAPSAVAAQVLADDLRIATE
CCCCEEEEEEECCCCCCCCHHCCCCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHEEEEC
NTAKWWTTHQHTGVTFKAGQLVIIDEASLAETLSLNRITLAAEEAGTKVLLVGDYAQLPS
CCCEEEEECCCCCEEEECCEEEEEECCHHHHHHCCCEEEEEECCCCCEEEEEECHHHCCC
VDAGGAFSLLIHDRHDAPELVDVHRFTHAWEKTASLELRHGRTPVIDTYLAQDRIHDGDA
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHCCCCCC
EAVTAAAYTAWRHDRQQGLASVLIAETRENVTALNIHTRADLILDSTLKPGPEITLSDGS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCEEECCCC
MAGVGDTIITRRNDRRLRNRHGWVHNGQTWTITAVRDDGSVTIRPPSARFGNSIVLPADY
CCCCCCCEEECCCCHHHHHHCCCEECCCEEEEEEEECCCEEEECCCCCHHCCEEEECHHH
VAEHVDLGYAVTAHRAQSITPTPPTSSSNPRRRGKPVCGYDARARIEPGLRHPRPCRRPR
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCHH
RRRRVPCELGRQPRTLGRAVRDEFVDVGSGGNQACVAGTEQLVRTTAGDRPRHRTDLASE
HHCCCCHHHCCCCHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHH
LVGLGRYPKRPRSRAGLNDHRCC
HHHCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]