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The map label for this gene is ybiT [H]

Identifier: 50842330

GI number: 50842330

Start: 923606

End: 924205

Strand: Reverse

Name: ybiT [H]

Synonym: PPA0844

Alternate gene names: 50842330

Gene position: 924205-923606 (Counterclockwise)

Preceding gene: 50842331

Following gene: 50842329

Centisome position: 36.1

GC content: 66.17

Gene sequence:

>600_bases
ATGACGTCGAGGTGTTGTGGGACGTCTGCACGGTCGCCGCTCTCGGGGTGCCCTTCGAGCGGTGTCGCCACCGGTCGTTG
TCGACGTTGTCGAGTGGTGAGCAAAAGCGGGCTCGCGCTGGAGGCGCTGCTGCGTGGCCCAGATGATCTGCTGTTGTTGG
ATGAGCCGGACAACTCCCTGGACGTGCCAGGCAAGCGCTGGTTGGAAGAGCAGTTGCGCGCGACGGACAACGGCGTGCTA
TACGTGAGTCACGACCGTGAGCTGCTGGCCCGGACGGCGACCTCGATCATCACACTGGAACTCGACGCTGCGGGCAACAC
TGCGTGGACGCATCCGGGCGGGTTCGACACGTACCACCGTGCGCGGGAGCAGCGGTTCGAGCGGTTGGACGAGCTGCGCC
GCCGCTGGGGCGAAGAGCACGCGAAGCTGCGCTCGCTCATGCTCATGTACAAGCAGAAGGCCGCTTACAACTCCGACATG
GCTTCCCGTTATCGGGCAGCGCAGACTCGGCTGACCCGGTTCGAGGAGGCCGGGCCGCCGCAGGGGCAACCTCGCGAGCA
GTGCCTTCAGATGCGGCTGCACAGTGGGCGGACCGGGTAG

Upstream 100 bases:

>100_bases
CAGCTCGCACGCTCTGAAGCCATGGTGAACAAGAAGGGCACCACCCAGTCACAGCTGGTCTACGCCTCAGCAATCTCTGA
ATGGGGCGAGGTGGGCGGCT

Downstream 100 bases:

>100_bases
CGCGTTGTGACCTGCGAGGCGCTGGAGCTGACGGGTCTGATGCGTGCATTCGATTTCGACGCGTTTTTCGGTGATCGGGT
CGCAGTACTCGGCTCGAACG

Product: ABC transporter ATP-binding protein fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTSRCCGTSARSPLSGCPSSGVATGRCRRCRVVSKSGLALEALLRGPDDLLLLDEPDNSLDVPGKRWLEEQLRATDNGVL
YVSHDRELLARTATSIITLELDAAGNTAWTHPGGFDTYHRAREQRFERLDELRRRWGEEHAKLRSLMLMYKQKAAYNSDM
ASRYRAAQTRLTRFEEAGPPQGQPREQCLQMRLHSGRTG

Sequences:

>Translated_199_residues
MTSRCCGTSARSPLSGCPSSGVATGRCRRCRVVSKSGLALEALLRGPDDLLLLDEPDNSLDVPGKRWLEEQLRATDNGVL
YVSHDRELLARTATSIITLELDAAGNTAWTHPGGFDTYHRAREQRFERLDELRRRWGEEHAKLRSLMLMYKQKAAYNSDM
ASRYRAAQTRLTRFEEAGPPQGQPREQCLQMRLHSGRTG
>Mature_198_residues
TSRCCGTSARSPLSGCPSSGVATGRCRRCRVVSKSGLALEALLRGPDDLLLLDEPDNSLDVPGKRWLEEQLRATDNGVLY
VSHDRELLARTATSIITLELDAAGNTAWTHPGGFDTYHRAREQRFERLDELRRRWGEEHAKLRSLMLMYKQKAAYNSDMA
SRYRAAQTRLTRFEEAGPPQGQPREQCLQMRLHSGRTG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=145, Percent_Identity=33.1034482758621, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787041, Length=160, Percent_Identity=32.5, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=150, Percent_Identity=34, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 22389; Mature: 22257

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRCCGTSARSPLSGCPSSGVATGRCRRCRVVSKSGLALEALLRGPDDLLLLDEPDNSL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCCCCEEEEECCCCCC
DVPGKRWLEEQLRATDNGVLYVSHDRELLARTATSIITLELDAAGNTAWTHPGGFDTYHR
CCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHH
AREQRFERLDELRRRWGEEHAKLRSLMLMYKQKAAYNSDMASRYRAAQTRLTRFEEAGPP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
QGQPREQCLQMRLHSGRTG
CCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSRCCGTSARSPLSGCPSSGVATGRCRRCRVVSKSGLALEALLRGPDDLLLLDEPDNSL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCCCCEEEEECCCCCC
DVPGKRWLEEQLRATDNGVLYVSHDRELLARTATSIITLELDAAGNTAWTHPGGFDTYHR
CCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHH
AREQRFERLDELRRRWGEEHAKLRSLMLMYKQKAAYNSDMASRYRAAQTRLTRFEEAGPP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
QGQPREQCLQMRLHSGRTG
CCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]