| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yhbJ [C]
Identifier: 50842300
GI number: 50842300
Start: 894512
End: 895387
Strand: Direct
Name: yhbJ [C]
Synonym: PPA0813
Alternate gene names: 50842300
Gene position: 894512-895387 (Clockwise)
Preceding gene: 50842299
Following gene: 50842301
Centisome position: 34.94
GC content: 60.5
Gene sequence:
>876_bases GTGAGCACCGAGCAGACGACGAAGACCCCACGAGTTGTCATTATCACCGGCATTTCTGGTGCTGGGCGTCGTACCGCAGC TCACGCTGTGGAGGACCTTGGCTGGTACGTCGTCGATAATCTTCCGCCCGCTATGTTGGGGGCCCTCGTTGACGAAATTG CCGCCAATAACATTGATCGCCTAGCGGTGGTTCTCGATGTGCGTAGCCGCATCATGTTTGACGCCCTAGGGGTGGCCGTC AATGCGCTCGACGAGCGCGGCATCGACCCTGCCATCGTCTTCTTGGAAGCGTCCGATGAGACAATTGTGCGCCGCCAGGA GTCCAGCCGTCGTCCGCTGCCGCTGCAACAAGGTGGTCATCTGCTCGACGCCGTTGCCCTTGAGCGGCGGATGCTGTCCG ACCTGCGAGCCGAGGCTGATCTCGTCATCGACACCACGTCGATCACTGCCCGCCAGCTAGCCCAACGCATCGACCATGCC TTTGCTGAGGGGATTGACGAAGGGCTGGCATTCCAGGTGATGTCCTTCGGGTTTAAGCGTGGGGTCCCGATCGATGCTGA CCTCGTCTTTGACGTCCGCTTCTTGCCAAACCCTTATTGGGTCCCTGAGCTGCGTCCCAAGACCGGTCTGTCTTCTGACG TTGCCTCCTATGTGATGGCCCAAGCTGGTGCCACAGAGTTCATTGACCGTGTTGAACAACTCCTGGGTGGCATGGCTCCG GGGTATCTTCGGGAGGGCAAGAAGCAGGTCACGGTGGCCGTTGGTTGCACAGGCGGAAAGCATCGCAGTACCGCCATCTC CGAGGAGCTGTCCACTCGGTTAGCAGCTCGGGGGCACCGTACCGCCGTCCTGCACCGAGACCTCGGGAAGGAATGA
Upstream 100 bases:
>100_bases GTCCCAGGACAAACCAGCCGAGGCCATCAACACCGCTACTGGCGAGGTTGTTGACGCCAACGGCCCAGACGCAGGGAGAT AACGGCACTACCCTTGAGCT
Downstream 100 bases:
>100_bases CGATGGTGTCAACCCCCTCCAAGCTGCCGGTCGTTACGGCCTTTGGCGGCGGACATGGGCTGGCTGTGTCCCTGCGAGCA CTGCGCCGTCTTACTGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSTEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDRLAVVLDVRSRIMFDALGVAV NALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGHLLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHA FAEGIDEGLAFQVMSFGFKRGVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE
Sequences:
>Translated_291_residues MSTEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDRLAVVLDVRSRIMFDALGVAV NALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGHLLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHA FAEGIDEGLAFQVMSFGFKRGVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE >Mature_290_residues STEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDRLAVVLDVRSRIMFDALGVAVN ALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGHLLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHAF AEGIDEGLAFQVMSFGFKRGVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAPG YLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=282, Percent_Identity=38.2978723404255, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y813_PROAC (Q6A9J7)
Other databases:
- EMBL: AE017283 - RefSeq: YP_055527.1 - ProteinModelPortal: Q6A9J7 - GeneID: 2933239 - GenomeReviews: AE017283_GR - KEGG: pac:PPA0813 - NMPDR: fig|267747.1.peg.804 - HOGENOM: HBG289732 - OMA: GIGCTGG - ProtClustDB: PRK05416 - BioCyc: PACN267747:PPA0813-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 31622; Mature: 31490
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDR CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCHHH LAVVLDVRSRIMFDALGVAVNALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHCCCH LLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHAFAEGIDEGLAFQVMSFGFKR HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE HHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHEEHHHHCCCC >Mature Secondary Structure STEQTTKTPRVVIITGISGAGRRTAAHAVEDLGWYVVDNLPPAMLGALVDEIAANNIDR CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCHHH LAVVLDVRSRIMFDALGVAVNALDERGIDPAIVFLEASDETIVRRQESSRRPLPLQQGGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHCCCH LLDAVALERRMLSDLRAEADLVIDTTSITARQLAQRIDHAFAEGIDEGLAFQVMSFGFKR HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GVPIDADLVFDVRFLPNPYWVPELRPKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAP CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC GYLREGKKQVTVAVGCTGGKHRSTAISEELSTRLAARGHRTAVLHRDLGKE HHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA