| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842297
Identifier: 50842297
GI number: 50842297
Start: 890633
End: 891796
Strand: Direct
Name: 50842297
Synonym: PPA0810
Alternate gene names: NA
Gene position: 890633-891796 (Clockwise)
Preceding gene: 50842294
Following gene: 50842298
Centisome position: 34.79
GC content: 56.01
Gene sequence:
>1164_bases ATGACGATCGAGGTAGTCGATGATTCGGCAAGGAATGTCTCAAAAACGTGGCGGAAAGTGACTTTCTCTGTCGTCGTTCC CTATCGGCCGGAATGGGTCACCGAGCCCATTGAGAATATGGCATCGAAGACTGTCGGGCCGGCGGAGCTTCTCGATTCTC TCGTTTCGAGCAGTGAAGATATACTGCAATCTTCCCGAGACCAAGCATATGAACCTCACAAATACTATTTTTCGAGGAGG ATTCGGGACGCGGTTAGGATGTATCGTCACGCCGTTTATGATGCAACGAGGGAAGATGCTATTCGCGCGAAGGTTGCGGA AAGGCGGAAATCGCATAAAGGGTCTATTCTTAACATTCCCGAAGGTCTGAGTTACCTGGGTGCTGAGCGTCGGGAATACG AGGATAGTCTCGGGGCTGTCGCGGGTGGTGAAGCATTCCACTACGCCGTTCTGCATTTTCGGCTTGATGACGTCACAGAC GCCGCGGTCGAAACGGCTGCCGCATGGCTGAAGCGCCCCGGAGGAGACGGTGCGAGGTATTTATCTGGTCTTCTGAGCGA CATCGGTCTAGGAAGATGTTTGTACTCATGGGGAGGCTTCTCCCAAGGCAACGCTGGGTGCGGCCGCGGGAAGGCCAGTT CGCGTGATCGTGGTTGTGGTGCTGGCGGGGCGCCCTCTCTTAATTGCAACCGAATCTTCGTCATGACCTTCGCAGAAGTG GATCCTCAGGACTTGCGGCACCCGTCCTATTTCGGACACCACAAGGCGTGGACTCCGGCGCAGGCCTGGCTGTATCACCT AGCAACTGGTGGGATCGGAATTTACCGAGGAGTTCCACCTAGTGACACGAGTGATGCTGCGAACGACGGGATGTTCTGCC TTGATGCGACGTGGGTAAGGATCGAGGAAGCCGGCATGGCAGTCATGACCCAGCCGGTGCTGCTCGAAGAGAGTAACCGC AAGCATGCTGGAGCCCTGTGCCTGCTGTGTCACAGTAGAATGCTCGACATCGTGATTCTGTGCCTACGGCAACGCACCTA CCTTGATCGCAGTGCCGAAAGTGAGGCGCGCGTCTTGGTGGGGAAGGGCCATTGGGGCGATGAGGAGTTAGACAGGCTAC TCGATCGTGAGCGTTCGGTGGCCGCTTTTCTTAATGGGCTGTGA
Upstream 100 bases:
>100_bases GTAGGCGACCCTTTCCCACTACCCTAACCGCGTTAGCTGAGAAGGCACCTCGTCGTGGCTAGGAGTGACGAGAATTGGTG AGCGTTGGAGGTTGTATTCG
Downstream 100 bases:
>100_bases TTCACCGAGGTTTCCGGGCGTCGTGAGGCAACCCTCGTCTTGAACGAGTTTCAGAAAGTTCTTGGCACTCCCGTCTTGCT TACGGAATTGCGGGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAELLDSLVSSSEDILQSSRDQAYEPHKYYFSRR IRDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIPEGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTD AAVETAAAWLKRPGGDGARYLSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPSLNCNRIFVMTFAEV DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVRIEEAGMAVMTQPVLLEESNR KHAGALCLLCHSRMLDIVILCLRQRTYLDRSAESEARVLVGKGHWGDEELDRLLDRERSVAAFLNGL
Sequences:
>Translated_387_residues MTIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAELLDSLVSSSEDILQSSRDQAYEPHKYYFSRR IRDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIPEGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTD AAVETAAAWLKRPGGDGARYLSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPSLNCNRIFVMTFAEV DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVRIEEAGMAVMTQPVLLEESNR KHAGALCLLCHSRMLDIVILCLRQRTYLDRSAESEARVLVGKGHWGDEELDRLLDRERSVAAFLNGL >Mature_386_residues TIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAELLDSLVSSSEDILQSSRDQAYEPHKYYFSRRI RDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIPEGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTDA AVETAAAWLKRPGGDGARYLSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPSLNCNRIFVMTFAEVD PQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVRIEEAGMAVMTQPVLLEESNRK HAGALCLLCHSRMLDIVILCLRQRTYLDRSAESEARVLVGKGHWGDEELDRLLDRERSVAAFLNGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42831; Mature: 42700
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAELLDSLVSSSED CEEEEECCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHH ILQSSRDQAYEPHKYYFSRRIRDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC EGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTDAAVETAAAWLKRPGGDGARY CCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHH LSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPSLNCNRIFVMTFAEV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVR CHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEEE IEEAGMAVMTQPVLLEESNRKHAGALCLLCHSRMLDIVILCLRQRTYLDRSAESEARVLV EHHCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GKGHWGDEELDRLLDRERSVAAFLNGL ECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIEVVDDSARNVSKTWRKVTFSVVVPYRPEWVTEPIENMASKTVGPAELLDSLVSSSED EEEEECCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHH ILQSSRDQAYEPHKYYFSRRIRDAVRMYRHAVYDATREDAIRAKVAERRKSHKGSILNIP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC EGLSYLGAERREYEDSLGAVAGGEAFHYAVLHFRLDDVTDAAVETAAAWLKRPGGDGARY CCHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHH LSGLLSDIGLGRCLYSWGGFSQGNAGCGRGKASSRDRGCGAGGAPSLNCNRIFVMTFAEV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC DPQDLRHPSYFGHHKAWTPAQAWLYHLATGGIGIYRGVPPSDTSDAANDGMFCLDATWVR CHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEEE IEEAGMAVMTQPVLLEESNRKHAGALCLLCHSRMLDIVILCLRQRTYLDRSAESEARVLV EHHCCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GKGHWGDEELDRLLDRERSVAAFLNGL ECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA