| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is fecB [C]
Identifier: 50842281
GI number: 50842281
Start: 876424
End: 877203
Strand: Reverse
Name: fecB [C]
Synonym: PPA0794
Alternate gene names: 50842281
Gene position: 877203-876424 (Counterclockwise)
Preceding gene: 50842284
Following gene: 50842280
Centisome position: 34.26
GC content: 48.72
Gene sequence:
>780_bases TTGGGCGGCACGGCGGCATGCACGCCATCCTTAACTGGAAATGAAAAACTTCAACCAGCCCATGCTGCAGCCATAAAGAA GGTCCCCAAGGTCGGCATGATATATGCTGTCAATTTAGAACGAATGCTTGCTACAAACCCAGACCTCGTCATCGCACCTG GAGCCGTAAGCCAGAACGTAACAGACAAACTTTCTTCTCAAGGAATTCCTGTGTTGAACATCAAAACGAGGTCACTGGAT GAGGTTCTCCAAACTTATCAAACCCTCGGTAAAGTACTCGGCCACACCAAAGAAGCCAAAAAGCGTTCCTCTCAAATTTC CGCACAGGTCAAGTCCACCGTTAACAAGATGCCAGCAGACGGCAAACGGGTCGCTATTCTGTTCGCAACAGCCACGTCAA TGTCACTAAAGTTAAACAACAGCATCGCCGGATCAATGGCCAAACTTCTCAAGTTGAAGAACATCGCTTCGTCGGCAATT CCAGATGACCCAAATGCCGAAACTGCCACGCTCAGTGTCGAGAAGATAACTCAGCAACAGCCCGATATCATCATGGTCAC CTCAATGGTACAGAACAACGCACTAGCCCGGCAAATAGTGAACAGAGAATTGACCAGCAACCCAGCCTGGCAGGCAGTGG ATGCCGTACGAAAAAAGAAAATCGTTTACCTGCCTCAACAATATTTCCTGTTCAACGGTGGCCCCAACTACCCAGATTCC GTGGCTTACATGGCAGCTTCTGTGCATCCGGAAATCTTTGGAAAACCCATTGAACCATGA
Upstream 100 bases:
>100_bases TTCACGTGTAACCGACAGCTTCGGCCATAAAGTCGATTTTAAGACAAGACCACAGCGAGTATGCCTGTTGTCTGCGACAC TACTCAGCATTTGGTATGAC
Downstream 100 bases:
>100_bases CAATACCCGCCAAAACAAAAACACTCACATCGACAACGGAGAGAACGTCAAGTAACAGCCACCGAAGGCACCACCTCACG GCAATCGTATTCGTCATCCT
Product: periplasmic binding protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MGGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERMLATNPDLVIAPGAVSQNVTDKLSSQGIPVLNIKTRSLD EVLQTYQTLGKVLGHTKEAKKRSSQISAQVKSTVNKMPADGKRVAILFATATSMSLKLNNSIAGSMAKLLKLKNIASSAI PDDPNAETATLSVEKITQQQPDIIMVTSMVQNNALARQIVNRELTSNPAWQAVDAVRKKKIVYLPQQYFLFNGGPNYPDS VAYMAASVHPEIFGKPIEP
Sequences:
>Translated_259_residues MGGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERMLATNPDLVIAPGAVSQNVTDKLSSQGIPVLNIKTRSLD EVLQTYQTLGKVLGHTKEAKKRSSQISAQVKSTVNKMPADGKRVAILFATATSMSLKLNNSIAGSMAKLLKLKNIASSAI PDDPNAETATLSVEKITQQQPDIIMVTSMVQNNALARQIVNRELTSNPAWQAVDAVRKKKIVYLPQQYFLFNGGPNYPDS VAYMAASVHPEIFGKPIEP >Mature_258_residues GGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERMLATNPDLVIAPGAVSQNVTDKLSSQGIPVLNIKTRSLDE VLQTYQTLGKVLGHTKEAKKRSSQISAQVKSTVNKMPADGKRVAILFATATSMSLKLNNSIAGSMAKLLKLKNIASSAIP DDPNAETATLSVEKITQQQPDIIMVTSMVQNNALARQIVNRELTSNPAWQAVDAVRKKKIVYLPQQYFLFNGGPNYPDSV AYMAASVHPEIFGKPIEP
Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27807; Mature: 27675
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERMLATNPDLVIAPGAVSQNV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEECCCCCCCH TDKLSSQGIPVLNIKTRSLDEVLQTYQTLGKVLGHTKEAKKRSSQISAQVKSTVNKMPAD HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC GKRVAILFATATSMSLKLNNSIAGSMAKLLKLKNIASSAIPDDPNAETATLSVEKITQQQ CCEEEEEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCC PDIIMVTSMVQNNALARQIVNRELTSNPAWQAVDAVRKKKIVYLPQQYFLFNGGPNYPDS CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEECCEEEEECCCCCCCHH VAYMAASVHPEIFGKPIEP HHHHHHHCCHHHCCCCCCC >Mature Secondary Structure GGTAACTPSLTGNEKLQPAHAAAIKKVPKVGMIYAVNLERMLATNPDLVIAPGAVSQNV CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEEECCCCCCCH TDKLSSQGIPVLNIKTRSLDEVLQTYQTLGKVLGHTKEAKKRSSQISAQVKSTVNKMPAD HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC GKRVAILFATATSMSLKLNNSIAGSMAKLLKLKNIASSAIPDDPNAETATLSVEKITQQQ CCEEEEEEEEECEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCC PDIIMVTSMVQNNALARQIVNRELTSNPAWQAVDAVRKKKIVYLPQQYFLFNGGPNYPDS CCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEECCEEEEECCCCCCCHH VAYMAASVHPEIFGKPIEP HHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA