| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is aroH [H]
Identifier: 50842214
GI number: 50842214
Start: 797294
End: 798712
Strand: Direct
Name: aroH [H]
Synonym: PPA0726
Alternate gene names: 50842214
Gene position: 797294-798712 (Clockwise)
Preceding gene: 50842213
Following gene: 50842215
Centisome position: 31.14
GC content: 58.84
Gene sequence:
>1419_bases ATGGCGGGAAGTAGAATCCCCGCCATGTCTCAGAGCGTTCCCAGTCTTGAGGCCCTCAATGCCCTGCCACGGGTGCAACA GCCGTCGTACCCCGATCCTCAGGCAACCGTTGAGGTCGTCAACCAGCTACGTAGTTTGCCCCCGTTGGTCTTCGCCGGAG AATGCGATGACCTTCGTGCCTATCTTGCGGCAGTGGCTAACCGCAAGGCGTTTTTGCTGCAAGGCGGCGATTGTGCTGAG ACTTTTGCAGGAGTAAACGCCGACAACATTAAGGGTAAGCTGCGAGTACTATTGTCAATGGCGGTCGTCATGACCTACGC AGGTCAGCTTCCGGTGGTCAAGGTGGGTCGCATTGCTGGGCAGTACGCCAAGCCGAGATCTAAGGATACCGAGACCCGTC GCGGCCTCACTCTGCCCAGTTACCGAGGTGACGCCGTCAACGGATTCGAGTTCACACCGGAAGCTCGGGAGCACGATCCT AAGCGTTTGATTGGGGTGTACAACGCTTCGGCAGCTACTCTCAACCTGGTACGAGCTTTCGCTACCGGCGGTTTTGCGGA TCTTCGCGGCATTCACGCGTGGAACGCTGACTTTGTGCGTAACTCCAATGTGGAAACTCGTTACGAGGCGCTGGCCGCGG AGATCGAACGGGCGTTGGTGTTCATGATGGCGTGCGGAGTCGAGGGCGATCAGCTCTCCACCGTTGACTTCTATGCTAGC CATGAAGCCCTGCTCATCGACTACGAGCACGCTATGACGCGGATCGACTCGCGCTCCCAGCTACCCTATGATTGCTCTGG CCATTTGCTGTGGATTGGTGAGCGGACCCGTCAGATTGATGGTGCCCACGTGGAGTTCCTGCGCCACGTGCGCAATCCGC TGGGGGTCAAGCTTGGCCCGACGACGACTGGGGAGGACGCCGTTGCTATCGCTGATGCCCTTGACCCCGATCACGAGCCT GGCCGTCTGACCTTCATCACCCGAATGGGAAGCAAGGCTGTGCGTACTAACCTGCCCAGAGTCATCGAGGCAGTGGAAGC CACTGGACGCAAGGTGGTGTGGAGCTGCGACCCCATGCACGGCAACACCTTCGAAACGAATGACGGCTACAAGACGCGGT CGTTTGCTGACATGTGCGACGAGGTTAACGGGTTCTTCGACGTCCATGAGGAGTTAGGTACCTGGCCTGGCGGTGTGCAC ATCGAGTTGACCGGGGACGACGTCACGGAGTGCTTGGGCGGGGTCGACAAGCTAGCAGAGTCCGATCTGACAAACCGCTA CGAGACCGCCTGCGATCCACGTCTGAACCGGAACCAGTCCTTGGAACTGGCCTTCATAATCGCTGAGAGATTGGCTGACA GCCGTATCAAGCGCGATGCCGTCAGCCCGCTGGCAAGATTCCGCAGCATCGACCTATGA
Upstream 100 bases:
>100_bases GAGCGCGATATTCACCCAGGTAGGTGAAAATCCCAGGGCTGGTGTTTCCGATGCGGTGGCTTAGCTTCGTCAGAGGGGTG GAACGGAACTGAAGAAGGTC
Downstream 100 bases:
>100_bases TCGATCCGGACGTCCCCTCAAGGTCCCTATCGGTGGGATTGTTCCGGTCGCGAATGTGACTGAACTGGTTGCCGCCACGT GATGCTGGCGGAAGACTGAA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MAGSRIPAMSQSVPSLEALNALPRVQQPSYPDPQATVEVVNQLRSLPPLVFAGECDDLRAYLAAVANRKAFLLQGGDCAE TFAGVNADNIKGKLRVLLSMAVVMTYAGQLPVVKVGRIAGQYAKPRSKDTETRRGLTLPSYRGDAVNGFEFTPEAREHDP KRLIGVYNASAATLNLVRAFATGGFADLRGIHAWNADFVRNSNVETRYEALAAEIERALVFMMACGVEGDQLSTVDFYAS HEALLIDYEHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGPTTTGEDAVAIADALDPDHEP GRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMHGNTFETNDGYKTRSFADMCDEVNGFFDVHEELGTWPGGVH IELTGDDVTECLGGVDKLAESDLTNRYETACDPRLNRNQSLELAFIIAERLADSRIKRDAVSPLARFRSIDL
Sequences:
>Translated_472_residues MAGSRIPAMSQSVPSLEALNALPRVQQPSYPDPQATVEVVNQLRSLPPLVFAGECDDLRAYLAAVANRKAFLLQGGDCAE TFAGVNADNIKGKLRVLLSMAVVMTYAGQLPVVKVGRIAGQYAKPRSKDTETRRGLTLPSYRGDAVNGFEFTPEAREHDP KRLIGVYNASAATLNLVRAFATGGFADLRGIHAWNADFVRNSNVETRYEALAAEIERALVFMMACGVEGDQLSTVDFYAS HEALLIDYEHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGPTTTGEDAVAIADALDPDHEP GRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMHGNTFETNDGYKTRSFADMCDEVNGFFDVHEELGTWPGGVH IELTGDDVTECLGGVDKLAESDLTNRYETACDPRLNRNQSLELAFIIAERLADSRIKRDAVSPLARFRSIDL >Mature_471_residues AGSRIPAMSQSVPSLEALNALPRVQQPSYPDPQATVEVVNQLRSLPPLVFAGECDDLRAYLAAVANRKAFLLQGGDCAET FAGVNADNIKGKLRVLLSMAVVMTYAGQLPVVKVGRIAGQYAKPRSKDTETRRGLTLPSYRGDAVNGFEFTPEAREHDPK RLIGVYNASAATLNLVRAFATGGFADLRGIHAWNADFVRNSNVETRYEALAAEIERALVFMMACGVEGDQLSTVDFYASH EALLIDYEHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGPTTTGEDAVAIADALDPDHEPG RLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMHGNTFETNDGYKTRSFADMCDEVNGFFDVHEELGTWPGGVHI ELTGDDVTECLGGVDKLAESDLTNRYETACDPRLNRNQSLELAFIIAERLADSRIKRDAVSPLARFRSIDL
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 51825; Mature: 51694
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSRIPAMSQSVPSLEALNALPRVQQPSYPDPQATVEVVNQLRSLPPLVFAGECDDLRA CCCCCCCCHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHH YLAAVANRKAFLLQGGDCAETFAGVNADNIKGKLRVLLSMAVVMTYAGQLPVVKVGRIAG HHHHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH QYAKPRSKDTETRRGLTLPSYRGDAVNGFEFTPEAREHDPKRLIGVYNASAATLNLVRAF HHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHEEEEECCCHHHHHHHHHH ATGGFADLRGIHAWNADFVRNSNVETRYEALAAEIERALVFMMACGVEGDQLSTVDFYAS HCCCHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC HEALLIDYEHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGP CCEEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECC TTTGEDAVAIADALDPDHEPGRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMH CCCCCCCEEEEHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC GNTFETNDGYKTRSFADMCDEVNGFFDVHEELGTWPGGVHIELTGDDVTECLGGVDKLAE CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH SDLTNRYETACDPRLNRNQSLELAFIIAERLADSRIKRDAVSPLARFRSIDL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGSRIPAMSQSVPSLEALNALPRVQQPSYPDPQATVEVVNQLRSLPPLVFAGECDDLRA CCCCCCCHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHH YLAAVANRKAFLLQGGDCAETFAGVNADNIKGKLRVLLSMAVVMTYAGQLPVVKVGRIAG HHHHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH QYAKPRSKDTETRRGLTLPSYRGDAVNGFEFTPEAREHDPKRLIGVYNASAATLNLVRAF HHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHEEEEECCCHHHHHHHHHH ATGGFADLRGIHAWNADFVRNSNVETRYEALAAEIERALVFMMACGVEGDQLSTVDFYAS HCCCHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC HEALLIDYEHAMTRIDSRSQLPYDCSGHLLWIGERTRQIDGAHVEFLRHVRNPLGVKLGP CCEEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECC TTTGEDAVAIADALDPDHEPGRLTFITRMGSKAVRTNLPRVIEAVEATGRKVVWSCDPMH CCCCCCCEEEEHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC GNTFETNDGYKTRSFADMCDEVNGFFDVHEELGTWPGGVHIELTGDDVTECLGGVDKLAE CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH SDLTNRYETACDPRLNRNQSLELAFIIAERLADSRIKRDAVSPLARFRSIDL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]