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The map label for this gene is yafL [C]

Identifier: 50842209

GI number: 50842209

Start: 793035

End: 794192

Strand: Direct

Name: yafL [C]

Synonym: PPA0721

Alternate gene names: 50842209

Gene position: 793035-794192 (Clockwise)

Preceding gene: 50842207

Following gene: 50842210

Centisome position: 30.97

GC content: 60.28

Gene sequence:

>1158_bases
GTGGAGCACAGGTATGGAGCTTCTCAGGTGAGCGGTAGCGCACCTCGACGTGGACGTGGCGTCGCATTTGCTGCCATCAC
GGGGGCAATCCTTCTCGGCACAGTGGCATCGGTTGATCCTGGGGCTCAGGCCGCTCCTGATCCTATTGATCAGGCGAAGG
TTCGCTTGGCTCAGCTCGATGAGCAGACCTCGAAAGTACAGGAGGACTACACCGAGGCCCAGGCTGCCCTCGACAAAGCT
CAGAAGGATCTCGATCGTTCGCAAAGAGACCTTAAGACCCAGTCAGACAAGGTTGCCACCATGCGCAAGGCTCTCGGCCG
CGTCGCGCTGAGCGACTACCAGAGCGGCGGCGGTGTCTCAATGACTACTCAGCTTGTGGCAAGTGGCGACTCTGGGCAGT
TTCTGTCCAAATTGGCGACCATTCAAAACGTCACGGAGCGCACCAGCGTGCAGTTCCAGGATTTCCAGGCTGAGCAGGCC
AGGCTGAAATCCATGAAGTCCCAGGCTGAGGCTGATCGCGCGACGATTGAGAGTCAGCGCAATCAACAGGCCAAGCTATT
GGCCGACGCGAAGAAGAAGGAACAGGAGGCCAAGCAGGTTGTTGACCGTCTGACTGCCCAGCAGCGCGCTGAACTTAAGC
GTCAACAAGCTGCCGAGGCCCAGGCCGCCGCTGCACATGCGGTGTCCCGATCTGCCGGACGTCCCACCGATCAGCAGAGT
GCCCTGGGGCAGCCGTCCAGCAGTTCTACCCAGGCTTCCCAAACTGGTAGTCAAGTGCCGATTCCTGACCCCTCCCATGG
AGTTTCATCGCGCGCTCAGAGCGCCCTCAATTTCGCGCTGGCTCAACTCGGTAAGCCCTACATCTGGGGCGGCACCGGCC
CGACCGACTACGATTGCTCTGGCCTCATGATGGCTTCCTGGGGCAAGGCTGGGGTTAGCCTTCCCCGCACCGCGGCTGCT
CAGTACGCAGCCGGTACCCCCGTATCGACCTCCGATTTGCAGCCGGGCGACTTGGTCTTCTTCTACCCGGGCATTACCCA
TGTCGGTATGTACATCGGTGATGGCAAGTTTATTCACGCCTCCAGTCCGCGAACTGGCATCAAAGTCTCCGTTCTAGCGC
AACAGCCCTCATACCAGGGCGCGCGTCGTTTCGGCTGA

Upstream 100 bases:

>100_bases
GTCCTGGTCCGATCGACCAAATCACAGGTGGACGGATGACTTGGCTCGCACCGCGTGATGACGCGGCGAGGGGCGGTCAG
GTGATGGTGAAGGGTAGACA

Downstream 100 bases:

>100_bases
TTTTCATTGCTTAGCGTTGGCATAGATATTGGCGGCACGAAGGTCGCCGCTGGTGTCGTAGATGAAAGTGGCCAGATTGT
TCGGCGTATTCAGCGCCTGA

Product: NPL/P60 family secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MEHRYGASQVSGSAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLDEQTSKVQEDYTEAQAALDKA
QKDLDRSQRDLKTQSDKVATMRKALGRVALSDYQSGGGVSMTTQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQA
RLKSMKSQAEADRATIESQRNQQAKLLADAKKKEQEAKQVVDRLTAQQRAELKRQQAAEAQAAAAHAVSRSAGRPTDQQS
ALGQPSSSSTQASQTGSQVPIPDPSHGVSSRAQSALNFALAQLGKPYIWGGTGPTDYDCSGLMMASWGKAGVSLPRTAAA
QYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHASSPRTGIKVSVLAQQPSYQGARRFG

Sequences:

>Translated_385_residues
MEHRYGASQVSGSAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLDEQTSKVQEDYTEAQAALDKA
QKDLDRSQRDLKTQSDKVATMRKALGRVALSDYQSGGGVSMTTQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQA
RLKSMKSQAEADRATIESQRNQQAKLLADAKKKEQEAKQVVDRLTAQQRAELKRQQAAEAQAAAAHAVSRSAGRPTDQQS
ALGQPSSSSTQASQTGSQVPIPDPSHGVSSRAQSALNFALAQLGKPYIWGGTGPTDYDCSGLMMASWGKAGVSLPRTAAA
QYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHASSPRTGIKVSVLAQQPSYQGARRFG
>Mature_385_residues
MEHRYGASQVSGSAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLDEQTSKVQEDYTEAQAALDKA
QKDLDRSQRDLKTQSDKVATMRKALGRVALSDYQSGGGVSMTTQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQA
RLKSMKSQAEADRATIESQRNQQAKLLADAKKKEQEAKQVVDRLTAQQRAELKRQQAAEAQAAAAHAVSRSAGRPTDQQS
ALGQPSSSSTQASQTGSQVPIPDPSHGVSSRAQSALNFALAQLGKPYIWGGTGPTDYDCSGLMMASWGKAGVSLPRTAAA
QYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHASSPRTGIKVSVLAQQPSYQGARRFG

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=201, Percent_Identity=36.81592039801, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=43.4426229508197, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788501, Length=106, Percent_Identity=38.6792452830189, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 40741; Mature: 40741

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHRYGASQVSGSAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLD
CCCCCCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EQTSKVQEDYTEAQAALDKAQKDLDRSQRDLKTQSDKVATMRKALGRVALSDYQSGGGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MTTQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQARLKSMKSQAEADRATIESQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQQAKLLADAKKKEQEAKQVVDRLTAQQRAELKRQQAAEAQAAAAHAVSRSAGRPTDQQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALGQPSSSSTQASQTGSQVPIPDPSHGVSSRAQSALNFALAQLGKPYIWGGTGPTDYDCS
HCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
GLMMASWGKAGVSLPRTAAAQYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHA
CCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHEEECCCEEEEC
SSPRTGIKVSVLAQQPSYQGARRFG
CCCCCCCEEEEEECCCCCCCHHCCC
>Mature Secondary Structure
MEHRYGASQVSGSAPRRGRGVAFAAITGAILLGTVASVDPGAQAAPDPIDQAKVRLAQLD
CCCCCCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EQTSKVQEDYTEAQAALDKAQKDLDRSQRDLKTQSDKVATMRKALGRVALSDYQSGGGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MTTQLVASGDSGQFLSKLATIQNVTERTSVQFQDFQAEQARLKSMKSQAEADRATIESQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQQAKLLADAKKKEQEAKQVVDRLTAQQRAELKRQQAAEAQAAAAHAVSRSAGRPTDQQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALGQPSSSSTQASQTGSQVPIPDPSHGVSSRAQSALNFALAQLGKPYIWGGTGPTDYDCS
HCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
GLMMASWGKAGVSLPRTAAAQYAAGTPVSTSDLQPGDLVFFYPGITHVGMYIGDGKFIHA
CCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHEEECCCEEEEC
SSPRTGIKVSVLAQQPSYQGARRFG
CCCCCCCEEEEEECCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA