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The map label for this gene is qcrC [H]

Identifier: 50842200

GI number: 50842200

Start: 784508

End: 785311

Strand: Reverse

Name: qcrC [H]

Synonym: PPA0712

Alternate gene names: 50842200

Gene position: 785311-784508 (Counterclockwise)

Preceding gene: 50842201

Following gene: 50842199

Centisome position: 30.67

GC content: 60.2

Gene sequence:

>804_bases
ATGAGATTCCTCTCCACGAAACGGCACAGCCGGGCAGCTAAACCCGTACTGTTGCTGCTGGCCTTGGTTCTGGTGGGGTG
CGTGTACGCCTTCGTCAGTCCTTCGGCCTCTGGCCGCGCGGATACGAATGCGTCAACCCAGGTAGCCCGGGGCAAGGAAA
TCTTCCAGCAGAACTGCTCGTCTTGCCACGGCTTGAACGGCGAGGGCACCACTCAGGGCCCGTCTTTGGCCGGTGTAGGC
GCAGCCGCAGTTGACTTCCAAATGGGTACTGGCCGTATGCCGATGGCGCGCCCCGAGGCCCAGGCCCCATCAAAGAAGAC
GAAGTTAACTAACGAGGAGACTGCCTCAGTTGGCGCATACGTTGCTTCCCTCGCTCCCGGACCAAAGGTCCCCTCCCCCC
AGAGCCTCAATACCTCAAACTTGAAGGCTGAGGAACTAGCTCGAGGTGCTGAACTGTTCAAGACTAACTGTTCGGCCTGC
CACAACATCGAGGGTCGCGGTGGCGCCCTCCCCGAGGGTGCTTATGCCCCCTCCCTCATGAAGACTTCCAACAAGCACAT
CTACGAAGCTATGCGCACTGGCCCGCAACAGATGCCGGTGTTCTCCAAATCCGTCATTACCGATCAGGACGCCCGCGAAA
TCATCGGCTACCTGCAGACCACTCATAGCGAACCCAATAATGGCGGCTTTGCCCTTGGCGGTATCGGTCCGGTCACCGAA
GGCCTATTCGGTTGGATCATTGGCATCGGCGGCCTGGTCCTGGTCGCTGGATGGCTGGCACGGAAGGGGGCTCGCGCGAA
GTGA

Upstream 100 bases:

>100_bases
TCCTATTACTGGCACTTCGTTGACGTCGTGTGGATCATCCTGTTCTCGGTGATCTACATCGTGCGCTGACGCCCCTACTC
CAAGAAGGGTGACTGTGGTG

Downstream 100 bases:

>100_bases
GCGATAAATACACCGAACGCGATGACTTGCCGGTCGACAACCCGGGGGTCGAACCCCATGTTGAGCGTTACACCGACGCT
AATCCAAAGGCCGGAAACCG

Product: cytochrome c heme-binding subunit

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome c subunit [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCSSCHGLNGEGTTQGPSLAGVG
AAAVDFQMGTGRMPMARPEAQAPSKKTKLTNEETASVGAYVASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSAC
HNIEGRGGALPEGAYAPSLMKTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE
GLFGWIIGIGGLVLVAGWLARKGARAK

Sequences:

>Translated_267_residues
MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCSSCHGLNGEGTTQGPSLAGVG
AAAVDFQMGTGRMPMARPEAQAPSKKTKLTNEETASVGAYVASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSAC
HNIEGRGGALPEGAYAPSLMKTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE
GLFGWIIGIGGLVLVAGWLARKGARAK
>Mature_267_residues
MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCSSCHGLNGEGTTQGPSLAGVG
AAAVDFQMGTGRMPMARPEAQAPSKKTKLTNEETASVGAYVASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSAC
HNIEGRGGALPEGAYAPSLMKTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE
GLFGWIIGIGGLVLVAGWLARKGARAK

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27854; Mature: 27854

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SCHGLNGEGTTQGPSLAGVGAAAVDFQMGTGRMPMARPEAQAPSKKTKLTNEETASVGAY
HHCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH
VASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSACHNIEGRGGALPEGAYAPSLM
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
KTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE
HHCHHHHHHHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
GLFGWIIGIGGLVLVAGWLARKGARAK
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFLSTKRHSRAAKPVLLLLALVLVGCVYAFVSPSASGRADTNASTQVARGKEIFQQNCS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SCHGLNGEGTTQGPSLAGVGAAAVDFQMGTGRMPMARPEAQAPSKKTKLTNEETASVGAY
HHCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHH
VASLAPGPKVPSPQSLNTSNLKAEELARGAELFKTNCSACHNIEGRGGALPEGAYAPSLM
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
KTSNKHIYEAMRTGPQQMPVFSKSVITDQDAREIIGYLQTTHSEPNNGGFALGGIGPVTE
HHCHHHHHHHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
GLFGWIIGIGGLVLVAGWLARKGARAK
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]