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The map label for this gene is qcrB [H]

Identifier: 50842198

GI number: 50842198

Start: 781780

End: 783459

Strand: Reverse

Name: qcrB [H]

Synonym: PPA0710

Alternate gene names: 50842198

Gene position: 783459-781780 (Counterclockwise)

Preceding gene: 50842199

Following gene: 50842196

Centisome position: 30.6

GC content: 59.94

Gene sequence:

>1680_bases
ATGGCCCGGCCAACTGGCATCGCCGAAGAATCACCCACCCTGCGCACCGCAACGGCTGATGACAAGCCATCGGGTCGCGG
GATGCGGATCGTCAACTGGCACGACGACCGTCTGGGTCTGGCCAAGATGGGTAAGGAAAATCTGCGCAAGGTTTTCCCTG
ACCATTGGTCATTCCTACTGGGCGAGATTGCCCTGTACTCGTTTGTTGTTCTGTTGCTCACAGGTGTATTCCTGACCATC
TGGTTCAAACCGTCAATGGCCGAGGTCGACTACACCGGCCCATATCAGCTGCTCAAGGGAACGCCCATGTCGGAGGCCTT
CGCCTCCACTCTGGACCTCTCCTTCGAGGTGCGTGGTGGCCTGTTAATTCGTCAGATCCACCACTGGGCCGCCATTCTCT
TCGTGGCAGCGGCCACTGTGCACATGCTGCGTATCTTCTTTACTGGTGCCTTCCGCAAACCCCGTGAGATCAACTGGTTG
ATCGGCCTAGGTCTGTTCATGCTGGCCATGGTCGAGGGCTTCGCCGGCTACTCGCTACCCGATGACCTGCTGTCCGGCAC
TGGCCTCCGGTTCGCCGATGGTCTAATGCGCGCCATCCCGCTAGTAGGCACCTGGGTTGAGTTCTTCGTCTTCAACGGCG
AGTTCCCGGGCACCGCAATTGTCCCCCGCCTGTACATGGTGCACATCCTGCTCATCCCAGCCCTGCTCCTGGGACTAGTG
GCCGCCCACCTCGCGCTGGTCGTCTACCACAAGCACACTCAGTACCCGGGCCCCGGACGCACCGAGAAGAATGTCGTGGG
TTACCCGCTGTTTCCGGTATACGCGGCCAAGGCCGGCGGTTTCTTTTTCGTGGTCTTTGGCGTGTTGACTCTCATGGGCA
CCTTCCTTCAGATCAACCCGGTCTGGAAATTCGGTCCCTATAACCCAGGCGAGGTAACGGCCGGGTCCCAACCCGACTGG
TACATGGGCTGGCTTGAAGGTGCGGTACGTATCACCCCTAACTGGGAGTGGCACATCGGTCACACCACCTGGAGCTGGAA
CATCTTCCTTCCTGGCGTGTGCCTCATGGGCGTGTTGTTCACCCTGCTAGTCGCATGGCCCTTCGTTGAAAAGTGGATCA
CCGGTGACGAGTCTGAGCACCACCTGCTCGACCGCCCGCGCAACGTCCCGACTCGTACCGCGCTCGGCGTCGCCGCCATG
AGTTGCTACGCCATGTTCTGGCTCTCAGGGGCCAACGACATTATCGCGACCCACTTCCACCTATCGCTGAACTCGATCAC
ATACTTCATGCGTGGTGCGATCTTCGTCGTCCCGATCATCACCTACCAGATCACCAAGCGCATCTGCGTAGCCCTGCAGC
GAGCAGACCGTCAGCGCCTACTCCTCGGGTCGCCCTCCGGCGAAATCATTCGCGAACCTAATGGTGCATTCCACGAGGCC
CACGTACCGGTCAGCGACAATGAGGCCTGGACCCTCACTCAGCAAAAGACCTACCCCATCCTTACTGCCGGCTCGATCGA
TGATCGTGGTCGTAAGGTCAGCAAGAAGCGTGCTCGCTGGATGAAGTGGTTCCTCGGTGACAACGTCCCCACAGTAACCC
GTGAAGAACTGGAGGCAGCCCGTTGTCACGCCGAGATCGGCTCCGGCGACTCCGCCCCCCAGGCAGAGATCGCCGACTGA

Upstream 100 bases:

>100_bases
ACAAGGGGTACCTGGTCGCTCGAAGCGACTTCACCGTTCCGGTGGGCCCGTCCTACTTTGAACGAGATTCTCGTCACGAC
TACAAGAAGGGTGACAACTG

Downstream 100 bases:

>100_bases
CCCCGCTCTACCTAGCGCGGAGGCCCTCTCGCTATGAGGGGGCCTGCGTCATATCCGGCCACGTAACTGCTGCCAGTTAC
GCTCCCACTCAGCTGGGTCC

Product: cytochrome b subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MARPTGIAEESPTLRTATADDKPSGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLLGEIALYSFVVLLLTGVFLTI
WFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGGLLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWL
IGLGLFMLAMVEGFAGYSLPDDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV
AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINPVWKFGPYNPGEVTAGSQPDW
YMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLFTLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAM
SCYAMFWLSGANDIIATHFHLSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA
HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAARCHAEIGSGDSAPQAEIAD

Sequences:

>Translated_559_residues
MARPTGIAEESPTLRTATADDKPSGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLLGEIALYSFVVLLLTGVFLTI
WFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGGLLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWL
IGLGLFMLAMVEGFAGYSLPDDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV
AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINPVWKFGPYNPGEVTAGSQPDW
YMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLFTLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAM
SCYAMFWLSGANDIIATHFHLSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA
HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAARCHAEIGSGDSAPQAEIAD
>Mature_558_residues
ARPTGIAEESPTLRTATADDKPSGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLLGEIALYSFVVLLLTGVFLTIW
FKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGGLLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWLI
GLGLFMLAMVEGFAGYSLPDDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLVA
AHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINPVWKFGPYNPGEVTAGSQPDWY
MGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLFTLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAMS
CYAMFWLSGANDIIATHFHLSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEAH
VPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAARCHAEIGSGDSAPQAEIAD

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 62448; Mature: 62317

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPTGIAEESPTLRTATADDKPSGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLL
CCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHCHHHHHHHCCHHHHHHH
GEIALYSFVVLLLTGVFLTIWFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGG
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCEEEECCC
LLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWLIGLGLFMLAMVEGFAGYSLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV
HHHHCCCCCHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINP
HHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEECC
VWKFGPYNPGEVTAGSQPDWYMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLF
EEECCCCCCCCCCCCCCCCHHHHEECCEEEECCCEEEEECCEEEEEEEECHHHHHHHHHH
TLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAMSCYAMFWLSGANDIIATHFH
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEC
HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAA
CCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RCHAEIGSGDSAPQAEIAD
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARPTGIAEESPTLRTATADDKPSGRGMRIVNWHDDRLGLAKMGKENLRKVFPDHWSFLL
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHCHHHHHHHCCHHHHHHH
GEIALYSFVVLLLTGVFLTIWFKPSMAEVDYTGPYQLLKGTPMSEAFASTLDLSFEVRGG
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCEEEECCC
LLIRQIHHWAAILFVAAATVHMLRIFFTGAFRKPREINWLIGLGLFMLAMVEGFAGYSLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DDLLSGTGLRFADGLMRAIPLVGTWVEFFVFNGEFPGTAIVPRLYMVHILLIPALLLGLV
HHHHCCCCCHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAHLALVVYHKHTQYPGPGRTEKNVVGYPLFPVYAAKAGGFFFVVFGVLTLMGTFLQINP
HHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEECC
VWKFGPYNPGEVTAGSQPDWYMGWLEGAVRITPNWEWHIGHTTWSWNIFLPGVCLMGVLF
EEECCCCCCCCCCCCCCCCHHHHEECCEEEECCCEEEEECCEEEEEEEECHHHHHHHHHH
TLLVAWPFVEKWITGDESEHHLLDRPRNVPTRTALGVAAMSCYAMFWLSGANDIIATHFH
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LSLNSITYFMRGAIFVVPIITYQITKRICVALQRADRQRLLLGSPSGEIIREPNGAFHEA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEC
HVPVSDNEAWTLTQQKTYPILTAGSIDDRGRKVSKKRARWMKWFLGDNVPTVTREELEAA
CCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RCHAEIGSGDSAPQAEIAD
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA