| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842192
Identifier: 50842192
GI number: 50842192
Start: 774709
End: 777147
Strand: Reverse
Name: 50842192
Synonym: PPA0704
Alternate gene names: NA
Gene position: 777147-774709 (Counterclockwise)
Preceding gene: 50842193
Following gene: 50842185
Centisome position: 30.35
GC content: 57.89
Gene sequence:
>2439_bases ATGAACAGAAGACTAACGGCCCAGACATTCCACATCTGGACGCGAAACAAGCACCGTATCAATTTGTCATGTCCATTCGC AGTGGTGATTGCTTGCTTCATCGCCCTGTACCTGACGCTGTCATCCTTCGCCCTCACTGGTTCACAGAAAAGAATTAGTT ATCTGGATGGTCATGACGCATCCATCACTATCAGCCAGACACAAACAACTCTGCGCCCTGCCCAGGGCACGGTAATCGAT CGACTGAGAAAATCGGGGGCACGGAACATATCCGTCATCACCACTGGTTCCAGCTTCCAAATTGACGGCCTTCGTACCAC CGGATTGTCGACAGGTTTCCACGATCGAATTCAATACATGGAATGGGCCTCGGGCTCACCCGCATCGCGATATCACCTGA CCACTGGCCATTGGCCCTCCAGTCCGGGAGAAGTTGCCCTGTCCGAGCCTTTGGCCGCACGTCTCCACGACCCCAGTCGC ATCCACGTCTTCTCCGACACCTCACGATTGCGGGTCGTGGGGACATTTCACGATGCCTACGCCACAGACGCTTTGGTGGC CATCGGCGCCGCGAGCGGTTGGAAATCCATGTCTGCCGCAGCATCCAAAGGATACCCGTCACTGTCGCCCATCGTGGAAT ACGTCTGGGATGGTCTGCCGCTCAGCACCGCCATACCCTTATTCAGCACGCTGTACGGGACTCCGACTGACTCACTTGTC ACATCCAGCCGTGATGGAGCAAAGATCTCCGCAAGCCCCCAGGTATCGTTGGCCTCTCGAAGCCCCTATCTCGTGATGAT CCCTTGCCTTTTGCTCACAGGTGCCGTCCAACTCACCGTGATGGCTAGGATCGCCACATCCATCCGCGCACAGCGGCAAT CAATGCTGAAACTGGGGATCCCGCTATCAGCAACGCTCGCGTCCGCACTCGGCTCGGTCCTCGCCATCTGTCTGGCGGCA TGGTCGGTAGGTGTATGTGGAGGCTGGATACTCGGAATGGCCCTTCGCAGATTCCTGGTGCCTCACCTACTCACACAACC CATCAGCCCACCGGTGTCGATCGCCCCATTAGCCATGACACTCCTGGCACTCACTGTCGCCATGAGTATCGCGGCCATTC CACTGACCGGCCCGCGGGCTGGTGGGCGAAACAGGACAACACCGCACCATGCCCGGTCGGCAACAACGCTACGGTGGGTC AGGCGAGTGGCTGGTGTCCTTCTCATTATCGGCGGACTACTCGCACTCCAAAACCGGACCCAACTCGACGACGTCATACA TGGTGCCATCTTCGTCTCATCCGGAGCCGTCCTCCTCATGCCCGATCTCATTTCCGGAATCATCTCGGTCATCAAGCTTC CAACACCCGCTGGTCTGCTGGCCGTAAAGACGCTGCACTTCAACGATGCACGAATTCGGATCATGGGGTCAGCGTTGTGT CTATGCCTGGTGATCCCTGCCAGTGTCAACGTCATCATGACCTCATACCAGCAGTCAACGGCGGCGCTGAGCATGGCCCC ACCGGACACCTTGATCCTGCAATCGCCAGATAGCAACCCCGTACCAAAAGACCTTCCCCGAAGCGTGCAGGCTGCGACCG GCATGAAGCGTGCCGTCAAGGTCGACATGCTCAGTGGCGAGATCACGTCGAACCATCACTCCGGAACCGCGCAGGCCGTC ATGGTCGTATCATCCCCGGAAGACGCCGAACGAGTACTGAATATGAAGCTCACGACCGAGGAGCGAACACATCTCAATAA CAGTTTCATGCTGTCATTTTCAGATGGCCCAGCAAAGACAATCCTCGCCCTAGACGATGGCCGCCGGGCCGCAATCCCAT CCAGCCGGGTCGAGGTCAACCCGACATGGGCATACATCTATGGCGGCGTCATTGTGAAAGCGACCCTAGAACGAATCCGA GCCCAATCGATACCACACCAGTGGGTATACACGGGGGTCCAGAAAAGCGGCATCACTCAAGCCGTCAACTATGTCCACCG CCAAGGCCTCGATCCACAGCTACTCACCTACCACGTGGAACCGGAACCTCCTCAGATGCCGTTCGCTTGGTGGACGGTGT GCCTTACCCTCGTCATCATCGCAGCGGGTATCACCGCCAGCGTTTCCGCGTCATTGGGACACATTGCACGAAATCAGAGC CGGCAGCTACTCGCCATAGGACTCCCGAAACGGCTGGGGGCAATGATCCCCATCCTCGAGAGCATGCTTCTGGTCGGATT GTGCTCCGTCATCGCGAGCGTCCTGGCCATCGTTCCGGTCGTGGTCGGGCGAAGCCTGTCTGAGTCCTTCACATTATGGG TGCCGAAAGATTGGGTCATCCTGTGGTGTGCCGGGCTTGGACTACTGATTGTGTTGTCCCCTTTAGCAGGACTCCGCGCG ATCAGGGCACGAGAGCGTACCGCCGATGCCCTGATCTAG
Upstream 100 bases:
>100_bases CACACGACAACCAGATGTGCGTCATCGTGGCCACACACGATCCACTCGCCACGAAGCACTGCGACTCCGTCACTACCCTC TTGGACGGACAACTCGTCGC
Downstream 100 bases:
>100_bases CCCAAACACGGACATCGCCGCCGCGGTCTGATCCGTGGCGGCGATGGACGGTCAGTGAGCGTAATCCCCGCGGTAGTACT CAAAAGCCCAACCCGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDASITISQTQTTLRPAQGTVID RLRKSGARNISVITTGSSFQIDGLRTTGLSTGFHDRIQYMEWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSR IHVFSDTSRLRVVGTFHDAYATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGIPLSATLASALGSVLAICLAA WSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMTLLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWV RRVAGVLLIIGGLLALQNRTQLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVKVDMLSGEITSNHHSGTAQAV MVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKTILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIR AQSIPHQWVYTGVQKSGITQAVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVILWCAGLGLLIVLSPLAGLRA IRARERTADALI
Sequences:
>Translated_812_residues MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDASITISQTQTTLRPAQGTVID RLRKSGARNISVITTGSSFQIDGLRTTGLSTGFHDRIQYMEWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSR IHVFSDTSRLRVVGTFHDAYATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGIPLSATLASALGSVLAICLAA WSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMTLLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWV RRVAGVLLIIGGLLALQNRTQLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVKVDMLSGEITSNHHSGTAQAV MVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKTILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIR AQSIPHQWVYTGVQKSGITQAVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVILWCAGLGLLIVLSPLAGLRA IRARERTADALI >Mature_812_residues MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDASITISQTQTTLRPAQGTVID RLRKSGARNISVITTGSSFQIDGLRTTGLSTGFHDRIQYMEWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSR IHVFSDTSRLRVVGTFHDAYATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGIPLSATLASALGSVLAICLAA WSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMTLLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWV RRVAGVLLIIGGLLALQNRTQLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVKVDMLSGEITSNHHSGTAQAV MVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKTILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIR AQSIPHQWVYTGVQKSGITQAVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVILWCAGLGLLIVLSPLAGLRA IRARERTADALI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86963; Mature: 86963
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDA CCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC SITISQTQTTLRPAQGTVIDRLRKSGARNISVITTGSSFQIDGLRTTGLSTGFHDRIQYM EEEEECCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCEEECCEEECCCCCCHHHHHHHH EWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSRIHVFSDTSRLRVVGTFHDAY HCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHCCCCCEEEEEECCCCEEEEEEEHHHH ATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV HHHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGI CCCCCCCEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLSATLASALGSVLAICLAAWSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWVRRVAGVLLIIGGLLALQNRT HHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC HHHHHHHHHHEECCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEHHHHHH LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVK HHHHHCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCHHHHEE VDMLSGEITSNHHSGTAQAVMVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKT EEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHEEEEECHHHHHCCCEEEEEECCCCCEE ILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIRAQSIPHQWVYTGVQKSGITQ EEEECCCCEECCCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCHHHCCHHH AVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVI CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH LWCAGLGLLIVLSPLAGLRAIRARERTADALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRRLTAQTFHIWTRNKHRINLSCPFAVVIACFIALYLTLSSFALTGSQKRISYLDGHDA CCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC SITISQTQTTLRPAQGTVIDRLRKSGARNISVITTGSSFQIDGLRTTGLSTGFHDRIQYM EEEEECCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCEEECCEEECCCCCCHHHHHHHH EWASGSPASRYHLTTGHWPSSPGEVALSEPLAARLHDPSRIHVFSDTSRLRVVGTFHDAY HCCCCCCCCEEEEECCCCCCCCCCEEECCCHHHHCCCCCEEEEEECCCCEEEEEEEHHHH ATDALVAIGAASGWKSMSAAASKGYPSLSPIVEYVWDGLPLSTAIPLFSTLYGTPTDSLV HHHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH TSSRDGAKISASPQVSLASRSPYLVMIPCLLLTGAVQLTVMARIATSIRAQRQSMLKLGI CCCCCCCEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLSATLASALGSVLAICLAAWSVGVCGGWILGMALRRFLVPHLLTQPISPPVSIAPLAMT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LLALTVAMSIAAIPLTGPRAGGRNRTTPHHARSATTLRWVRRVAGVLLIIGGLLALQNRT HHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QLDDVIHGAIFVSSGAVLLMPDLISGIISVIKLPTPAGLLAVKTLHFNDARIRIMGSALC HHHHHHHHHHEECCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEHHHHHH LCLVIPASVNVIMTSYQQSTAALSMAPPDTLILQSPDSNPVPKDLPRSVQAATGMKRAVK HHHHHCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCHHHHEE VDMLSGEITSNHHSGTAQAVMVVSSPEDAERVLNMKLTTEERTHLNNSFMLSFSDGPAKT EEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHEEEEECHHHHHCCCEEEEEECCCCCEE ILALDDGRRAAIPSSRVEVNPTWAYIYGGVIVKATLERIRAQSIPHQWVYTGVQKSGITQ EEEECCCCEECCCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCHHHCCHHH AVNYVHRQGLDPQLLTYHVEPEPPQMPFAWWTVCLTLVIIAAGITASVSASLGHIARNQS HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC RQLLAIGLPKRLGAMIPILESMLLVGLCSVIASVLAIVPVVVGRSLSESFTLWVPKDWVI CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH LWCAGLGLLIVLSPLAGLRAIRARERTADALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA