| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842157
Identifier: 50842157
GI number: 50842157
Start: 737973
End: 738608
Strand: Direct
Name: 50842157
Synonym: PPA0670
Alternate gene names: NA
Gene position: 737973-738608 (Clockwise)
Preceding gene: 50842156
Following gene: 50842159
Centisome position: 28.82
GC content: 62.26
Gene sequence:
>636_bases GTGGCGGTTGTCGCAGCCGTAGCAGCCATCGTCGGGTGCTCCAGAACTACCCCTGCGGTGCCTGAGGCCGTCGTGCCTAC CTCATCAGTGACTTCGACGCCGAGGTATTCACCGCTTTCACAGGCCAGCGCTACGCCGCAACGGATGACCAGTGCCACGT CGCAACGAGTGACCAACGTCGGTGGAGCGCAAGGGGCATTGACGTGTCGCCGAGGTGAGAAGGCCGCTATGGCGTTCAGT GATGTCGATGCGGCTCTGGGCGCACGGATCACGGTGTTGACGATTCGTAATTGCGGGTCTTCGGTGATGATCCTGCCCGT CATGCCACAGCTTCGCCAGATCACCGAGGCTGGAGCTCGAGTGCCAGTGGCGTGGCAACCTTATGACCCCAAGGCCAGGT CAAAGCGATTGGCTCCCGGGAAGGTCACGAGTTGGGAGCTGTCCTGGCATTCCAATGGCGACTGTGAGCACCGCGGGGCA TGGCGGCTGGAAGCCAAAGTGGGGACGACAACGGCGATGCTGGTGGGATGCCTAGACCTAGGGAGCTCCTACGCTTTAAC CGGCGAATCTTCGACAGGACCCGGTGGCTCCGACGCCGTTCCAGTGCCTGAAGCCGCAGTGAGATGGTCGGACTGA
Upstream 100 bases:
>100_bases TGCTAGCGTCGCGGCCATGGATCAACGGCATCATGCTGGTTCTTGTATTGGCTTTCTGGCCTATCGTGACTATGGCGCTG CGATGAAAATTGGGCGTGTA
Downstream 100 bases:
>100_bases GTTGGGGGTGTGTAGTTCGAGGCTTGTTTTATACGCCGCCAGGGGAGCAACCGTAGTTGCGCCCCCGGCGAGTAGAACGA CTCAGATGTCGTAGTACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MAVVAAVAAIVGCSRTTPAVPEAVVPTSSVTSTPRYSPLSQASATPQRMTSATSQRVTNVGGAQGALTCRRGEKAAMAFS DVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGARVPVAWQPYDPKARSKRLAPGKVTSWELSWHSNGDCEHRGA WRLEAKVGTTTAMLVGCLDLGSSYALTGESSTGPGGSDAVPVPEAAVRWSD
Sequences:
>Translated_211_residues MAVVAAVAAIVGCSRTTPAVPEAVVPTSSVTSTPRYSPLSQASATPQRMTSATSQRVTNVGGAQGALTCRRGEKAAMAFS DVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGARVPVAWQPYDPKARSKRLAPGKVTSWELSWHSNGDCEHRGA WRLEAKVGTTTAMLVGCLDLGSSYALTGESSTGPGGSDAVPVPEAAVRWSD >Mature_210_residues AVVAAVAAIVGCSRTTPAVPEAVVPTSSVTSTPRYSPLSQASATPQRMTSATSQRVTNVGGAQGALTCRRGEKAAMAFSD VDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGARVPVAWQPYDPKARSKRLAPGKVTSWELSWHSNGDCEHRGAW RLEAKVGTTTAMLVGCLDLGSSYALTGESSTGPGGSDAVPVPEAAVRWSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21895; Mature: 21764
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVAAVAAIVGCSRTTPAVPEAVVPTSSVTSTPRYSPLSQASATPQRMTSATSQRVTNV CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GGAQGALTCRRGEKAAMAFSDVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGAR CCCCCEEEECCCCCCEEEHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHHHHHHHCCCC VPVAWQPYDPKARSKRLAPGKVTSWELSWHSNGDCEHRGAWRLEAKVGTTTAMLVGCLDL CCEEECCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHC GSSYALTGESSTGPGGSDAVPVPEAAVRWSD CCCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVVAAVAAIVGCSRTTPAVPEAVVPTSSVTSTPRYSPLSQASATPQRMTSATSQRVTNV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GGAQGALTCRRGEKAAMAFSDVDAALGARITVLTIRNCGSSVMILPVMPQLRQITEAGAR CCCCCEEEECCCCCCEEEHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHHHHHHHCCCC VPVAWQPYDPKARSKRLAPGKVTSWELSWHSNGDCEHRGAWRLEAKVGTTTAMLVGCLDL CCEEECCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHC GSSYALTGESSTGPGGSDAVPVPEAAVRWSD CCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA