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The map label for this gene is ybgI [C]

Identifier: 50842155

GI number: 50842155

Start: 735527

End: 736708

Strand: Reverse

Name: ybgI [C]

Synonym: PPA0668

Alternate gene names: 50842155

Gene position: 736708-735527 (Counterclockwise)

Preceding gene: 50842158

Following gene: 50842154

Centisome position: 28.77

GC content: 63.45

Gene sequence:

>1182_bases
ATGGCAGACAATTCCTCTCGCACCTCTATCCCGCAATCCTGCAGCGACCAGATCACTGTCAGCCAGGTGCGCGCCACTCT
GGATCAGTGGTATCCGCCGTCCCTGGCAGAATCGTGGGATGCCCCCGGTCTGGTGTGCGGGGATCCCGACGACACCGTCA
AGCGGATCGTTTGCGCCCTGGAGGCCACTGACACCGTCGTTGATGCCGCCATCGAGGCCCACGCCGATATGCTCGTCGTT
CACCATCCTCTTCTGATGCGAGGCGCCACGTCGGTGGCAGCGGATACCCCAAAAGGACGCATCGTTCACCGACTTATTCG
CCACCGCATTGCCCTCATGAGTGCCCATACCAACGCCGACGCCGCAGTCGGCGGAGTCAATGACGTGCTCGCTCGGTTGT
TGGGGGTGACCGTCGAGTGCCCCCTGGAACCGGCAGCGCAGCCAGTCGACCTGTGGGGAGTCCAAGTACCAGTCGATGCC
GCTGAGGCACTGCGCAATGCCCTCTTCGGGGCGGGGGCGGGGCAATTTGACGGCTACGACCTGTGCAGTTTCGAGTCTGT
GGGGCGTGGCCAGTTCCGCCCCCTAAGCGGGTCTCATCCGGCCCTCGGCACCACCAACCAGGTTGAAACCGTCGAGGAAG
TACGCATCCACGTCGTCGCGCCGGCCATGATGCGCTCCACGATACGCAAGGCCCTTGTTGATGCTCACCCCTATGAGGTA
CCCGCCTACGATGTGAAAACCATCGACTCTGGATCCCGTCCTGGACCTGCCACGCCAGGAATCGGGCGCATCGGGCACCT
CGACGAGCCAATGACCCTCCGCAGTTTTACCCAGCGCGTATCCGAACGGCTCCCCCACACTGTGTGGGGGGTGCGAACCG
CAGGTAACCCGGATCAGCTCATCACCACAGTCGCTCTATGTTCTGGCGCCGGAGACTCTCTCCTCGACGCCGCGGCAGCC
AGCGGTGCTGACGTCTACCTCACTAGCGACCTGCGTCACCACCCGGCTGACGAGCATCTTCGCGCCAACGGCCCTGCCCT
CATCGACACCGCCCACTGGGCATCTGAGTCTCCCTGGTGCGCCGACGTTGCACGCCGCCTCCATGACGAACTAGGGCTCC
CCTGCCAGGATCTAGGTATCCGAACTGACCCGTGGACCATTGGAACGACAGTGGCACAATAG

Upstream 100 bases:

>100_bases
TTGCCTGGCTATATCGGACACGATTGGGAACCTTCTTGCAACAGTCATGCACACCACCATCGTTCGGTGAACGGCCATAG
CCTCACGCTACCGTGAAGCT

Downstream 100 bases:

>100_bases
AGGGACGTGACAAGCACTGATCCCCACGACTACCGAGACGACATTCGTCATGACCGCGAATTCGTTAATGACACCGAAGC
GGTCATTCGGTTGGGATCAA

Product: NIF3 (NGG1p interacting factor 3)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCALEATDTVVDAAIEAHADMLVV
HHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNADAAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDA
AEALRNALFGAGAGQFDGYDLCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV
PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQLITTVALCSGAGDSLLDAAAA
SGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWCADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ

Sequences:

>Translated_393_residues
MADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCALEATDTVVDAAIEAHADMLVV
HHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNADAAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDA
AEALRNALFGAGAGQFDGYDLCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV
PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQLITTVALCSGAGDSLLDAAAA
SGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWCADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ
>Mature_392_residues
ADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCALEATDTVVDAAIEAHADMLVVH
HPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNADAAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDAA
EALRNALFGAGAGQFDGYDLCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEVP
AYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQLITTVALCSGAGDSLLDAAAAS
GADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWCADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=354, Percent_Identity=25.7062146892655, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI215272360, Length=354, Percent_Identity=25.7062146892655, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI56605983, Length=354, Percent_Identity=25.7062146892655, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI215272362, Length=125, Percent_Identity=32.8, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=33.0708661417323, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41833; Mature: 41702

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCHHHHHHHHHHH
EATDTVVDAAIEAHADMLVVHHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNAD
HHHHHHHHHHHHHHHCEEEECCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
AAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDAAEALRNALFGAGAGQFDGYD
HHCCCHHHHHHHHHCCEEECCCCCCCCCHHHCCEECCHHHHHHHHHHHHCCCCCCCCCCC
LCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCCCCC
PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQL
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCHHHH
ITTVALCSGAGDSLLDAAAASGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWC
HHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHH
ADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADNSSRTSIPQSCSDQITVSQVRATLDQWYPPSLAESWDAPGLVCGDPDDTVKRIVCAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCHHHHHHHHHHH
EATDTVVDAAIEAHADMLVVHHPLLMRGATSVAADTPKGRIVHRLIRHRIALMSAHTNAD
HHHHHHHHHHHHHHHCEEEECCHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
AAVGGVNDVLARLLGVTVECPLEPAAQPVDLWGVQVPVDAAEALRNALFGAGAGQFDGYD
HHCCCHHHHHHHHHCCEEECCCCCCCCCHHHCCEECCHHHHHHHHHHHHCCCCCCCCCCC
LCSFESVGRGQFRPLSGSHPALGTTNQVETVEEVRIHVVAPAMMRSTIRKALVDAHPYEV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCCCCC
PAYDVKTIDSGSRPGPATPGIGRIGHLDEPMTLRSFTQRVSERLPHTVWGVRTAGNPDQL
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCHHHH
ITTVALCSGAGDSLLDAAAASGADVYLTSDLRHHPADEHLRANGPALIDTAHWASESPWC
HHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCCCHH
ADVARRLHDELGLPCQDLGIRTDPWTIGTTVAQ
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]