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The map label for this gene is 50842136

Identifier: 50842136

GI number: 50842136

Start: 713577

End: 714449

Strand: Direct

Name: 50842136

Synonym: PPA0649

Alternate gene names: NA

Gene position: 713577-714449 (Clockwise)

Preceding gene: 50842135

Following gene: 50842138

Centisome position: 27.87

GC content: 61.4

Gene sequence:

>873_bases
ATGGCCAACACCGTCACAACTAGGAACGCCGTGCCGAGAGGGGTCGTGGTTCTTTTCGCCGTCACTGCTGTCGCCATCAC
TGTCACGTTGGCGCTGGGATCGACGGTGTGTGCCACTGATGCCTCGGCCTCGTGCCCGAACTGGCCCGGTTGTTATGTCG
GTCGTCTCACCCCGTTGGACGCTACCCAGCCGTGGGTCGAGTTCATCCATCGCGTCATTTCGGCCTCGGTGGGTCTGTTC
GCGCTCGCCAGCGTCATCGTCGGCATGGTGTATCGACATGCTGACAAGCTGCTGGCTGCCCTCCCGATCGTAGCTCTGTT
GGGGGCGTTGACGTCCGGCGTGTTCGGTATGATGACCATCAAGTGGGGGATTAACTCGGTTGAGGCCTCTTTCGACCTGC
TTGCCGCGATTATCTCGATGGGAGCTATGTGGCGGGCTTACTTTGTTGCGCGTAAGCCACGGTCGTCGTGGAGATGGAAT
GGGCGGACCAAGCTTGGGATTGGAGCTGTCGCCTTCCTCGTTATCGGCCACTTCTTCGCTGTGCAGGTGGCCGGTTGCGG
GTCGCTGACCCGTTGTATGGGCTGGGCGATGTTCGTACGTGGTGCCGGGGACGGACCTTTCGCTGGCTGGATTGCTCAGC
AGGCCATCATGGGAATCGGAATGCTGCTCGCGATCGTTTCCCTCGTGGCTCGCTGGGGGCGTCGCAATGGCTGGGACATT
CTCTGCGCTGTGTTCATCGTCATTGAGCTCGTCGTCGGGGTGCTCATCGCCGTTAACGGATCCAGCCACGGTCTGGGAAC
CTTGCACGCGATCCCCGCCGTGCTCATCCTGTGCCTGACCATGACGGCGACGATGCGCAGTGCCAGAGGCTGA

Upstream 100 bases:

>100_bases
GCCTGCCGACGGGCGTGCCCGGCGGTGGTGGCAGTATCAGACAGTCCGCGCCTTCGGCACCTGTGCCGACAAACGGCAAT
CAGCACCATCGAGGAATGTT

Downstream 100 bases:

>100_bases
GAAGTCTGGACACCGCGCATCGACACTGGATCAGTGGCAAGCGCGTCCCCAGATCTCTTGCATCCAGGCCTCGATCTCGT
CGACCTGACGCGGGCAATCC

Product: putative cytochrome oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLDATQPWVEFIHRVISASVGLF
ALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTIKWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWN
GRTKLGIGAVAFLVIGHFFAVQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI
LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG

Sequences:

>Translated_290_residues
MANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLDATQPWVEFIHRVISASVGLF
ALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTIKWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWN
GRTKLGIGAVAFLVIGHFFAVQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI
LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG
>Mature_289_residues
ANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLDATQPWVEFIHRVISASVGLFA
LASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTIKWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWNG
RTKLGIGAVAFLVIGHFFAVQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDIL
CAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG

Specific function: Unknown

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30561; Mature: 30430

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEECCCCCCC
ATQPWVEFIHRVISASVGLFALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWNGRTKLGIGAVAFLVIGHFFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI
HHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANTVTTRNAVPRGVVVLFAVTAVAITVTLALGSTVCATDASASCPNWPGCYVGRLTPLD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCEECCCCCCC
ATQPWVEFIHRVISASVGLFALASVIVGMVYRHADKLLAALPIVALLGALTSGVFGMMTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWGINSVEASFDLLAAIISMGAMWRAYFVARKPRSSWRWNGRTKLGIGAVAFLVIGHFFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VQVAGCGSLTRCMGWAMFVRGAGDGPFAGWIAQQAIMGIGMLLAIVSLVARWGRRNGWDI
HHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LCAVFIVIELVVGVLIAVNGSSHGLGTLHAIPAVLILCLTMTATMRSARG
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA