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The map label for this gene is 50842128

Identifier: 50842128

GI number: 50842128

Start: 706002

End: 706655

Strand: Reverse

Name: 50842128

Synonym: PPA0641

Alternate gene names: NA

Gene position: 706655-706002 (Counterclockwise)

Preceding gene: 50842131

Following gene: 50842126

Centisome position: 27.6

GC content: 61.62

Gene sequence:

>654_bases
GTGAGTCCAGCACAGCCCAGACATCAAGTCCCCGACGCCCGGTCGTGGGAGTACGCCGACGGCTTCGTCGCACCCTCCCC
GGCTCTACAGGAGGCCCGCGAAGCAGCCCGCGCTGATCAGTGGGAAGTGCTCGGCAACGGCACCACCGCCTTGCTGACCT
TCTTGGCGCGCACCATGCAGGCCGGGAGCGTCGTCACCATCGGCACTGACGCCGGAGTCTCAGGGCTGGCCCTCTTGGAG
GGCATGACCGATCATGGTGTCTTGACCAGCATCGACCCCGACGCTGAGCGTCAGGCTGCTGCCCGTAAGGTTCTGAGCCT
GGCCCGTATCCGCTCTAATCAGGTGCGCCTCATCACCGGGACTCCGCTGGATGTGCTACCTAAACTGCGTGATGGCGCCT
ACGACATAGTGCTCATCAATGGCGACCGACTTGAATACGTGGAATACGTCTCCCAGGCCCTACGCTTACTCCGCCCCGGA
GGCGTTGTTGTCGTTAACGACGCGCTGGCCAACAACCACATCGCTGATCCGGATAATGAGGACGATGACACCCTCATCAT
CCGCGAAACCCTCGACTCGGTGCTAGAGACCGAAGAATTCACCCCGGTGCTGCTACCCGTTGGTGAAGGTTTGCTGTTGG
CCACGAAAAGTTGA

Upstream 100 bases:

>100_bases
TAAGCAGACGGCCAAAAACGGGAGCGGACATGCAAAACCTCCTTGTATAGCTGGTGCCCATGGTAGCCACGAGATGGCCT
CAGCGGGATAGGCTGTTAGT

Downstream 100 bases:

>100_bases
GCTTGCGCGTCTGACGCAAGACAAAACGAATCGGCTCCCCGAAAAATGGGGAGCCGATTCGTGCGTCCTGAAGATCGCTC
AATCAATAGGGAACCGTGAT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQAGSVVTIGTDAGVSGLALLE
GMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITGTPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPG
GVVVVNDALANNHIADPDNEDDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS

Sequences:

>Translated_217_residues
MSPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQAGSVVTIGTDAGVSGLALLE
GMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITGTPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPG
GVVVVNDALANNHIADPDNEDDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS
>Mature_216_residues
SPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQAGSVVTIGTDAGVSGLALLEG
MTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITGTPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPGG
VVVVNDALANNHIADPDNEDDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001127, Length=179, Percent_Identity=28.4916201117318, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565612, Length=180, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25148771, Length=180, Percent_Identity=26.1111111111111, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 23333; Mature: 23201

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC
AGSVVTIGTDAGVSGLALLEGMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITG
CCCEEEEECCCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
TPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPGGVVVVNDALANNHIADPDNE
CCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
DDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS
CCCEEEEHHHHHHHHHHHCCCEEEEECCCCEEEEECC
>Mature Secondary Structure 
SPAQPRHQVPDARSWEYADGFVAPSPALQEAREAARADQWEVLGNGTTALLTFLARTMQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC
AGSVVTIGTDAGVSGLALLEGMTDHGVLTSIDPDAERQAAARKVLSLARIRSNQVRLITG
CCCEEEEECCCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
TPLDVLPKLRDGAYDIVLINGDRLEYVEYVSQALRLLRPGGVVVVNDALANNHIADPDNE
CCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
DDDTLIIRETLDSVLETEEFTPVLLPVGEGLLLATKS
CCCEEEEHHHHHHHHHHHCCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA