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The map label for this gene is 50842122

Identifier: 50842122

GI number: 50842122

Start: 700932

End: 701540

Strand: Reverse

Name: 50842122

Synonym: PPA0635

Alternate gene names: NA

Gene position: 701540-700932 (Counterclockwise)

Preceding gene: 50842126

Following gene: 50842118

Centisome position: 27.4

GC content: 56.32

Gene sequence:

>609_bases
TTGGTTCAACGAATGACGGCAAAAGGCCATCACCGACGTCAAAAACTCATCCGATCAGCAGCATCATTGTTGAACAGTGG
TGGCCCTAGCGCCGTCACCATGAGAGCTGCAGCACGCATGGCAGATCTCTCACCCTCCTCTACCGTGTATTACTTTGATG
ACCACGAAGAACTCCTGGCTGAAGCCGCCAAACTCAATATTCGAGCGTGGGCTCACATCGCTGAAACGATTGCGGACGAG
GCTGAAAACCATCGCCTCAAAACCGGGGTGGATGACGTGATCGAATACCTGATTCGAGCAATGATCACACGCCCAGCTCC
TCTTCTCGGACATTACCTCGAGCTCATCTCAGCAGGAGACAACGAAACCATCTCCAACGCCTACCACGCCGGACGCGGCC
GGCTGAACAATGCCATATCACGCATTCTCGCCGTCGCTAACCTCCCCTACCCAGCAGAGCTCGTGATCGCCGTCATTGAC
GGCGGAATCGTCACAGCGCTGTCTGAGGGACGCGATCCCCATGCAACCGTCGAAGTCCTTCTTCGCCAGCTGATCAGCCT
GCCGACACACAAAGCCCCGATGTCACAAGCCCCGCCCACAACGGACTGA

Upstream 100 bases:

>100_bases
CACGGACCAGTCCGAGGAAAACGTGCGAAAGACGACCCTGAGATTGCTATGGTGAACGCACTTGACACATTACGCATTGC
GGCATAGCGAGGTGACAAAA

Downstream 100 bases:

>100_bases
GACGGAGTCCCCCTAGACGACCTCACTGAGGTCACGCCCCGTGTGCTCATGCGAAGCGACCATGGCGCACAGGGACAGGA
GCGAGACTGCTGTCAGGTAC

Product: putative regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVQRMTAKGHHRRQKLIRSAASLLNSGGPSAVTMRAAARMADLSPSSTVYYFDDHEELLAEAAKLNIRAWAHIAETIADE
AENHRLKTGVDDVIEYLIRAMITRPAPLLGHYLELISAGDNETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVID
GGIVTALSEGRDPHATVEVLLRQLISLPTHKAPMSQAPPTTD

Sequences:

>Translated_202_residues
MVQRMTAKGHHRRQKLIRSAASLLNSGGPSAVTMRAAARMADLSPSSTVYYFDDHEELLAEAAKLNIRAWAHIAETIADE
AENHRLKTGVDDVIEYLIRAMITRPAPLLGHYLELISAGDNETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVID
GGIVTALSEGRDPHATVEVLLRQLISLPTHKAPMSQAPPTTD
>Mature_202_residues
MVQRMTAKGHHRRQKLIRSAASLLNSGGPSAVTMRAAARMADLSPSSTVYYFDDHEELLAEAAKLNIRAWAHIAETIADE
AENHRLKTGVDDVIEYLIRAMITRPAPLLGHYLELISAGDNETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVID
GGIVTALSEGRDPHATVEVLLRQLISLPTHKAPMSQAPPTTD

Specific function: Unknown

COG id: COG3226

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21912; Mature: 21912

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRMTAKGHHRRQKLIRSAASLLNSGGPSAVTMRAAARMADLSPSSTVYYFDDHEELLA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
EAAKLNIRAWAHIAETIADEAENHRLKTGVDDVIEYLIRAMITRPAPLLGHYLELISAGD
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVIDGGIVTALSEGRDPHATVEVL
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHH
LRQLISLPTHKAPMSQAPPTTD
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVQRMTAKGHHRRQKLIRSAASLLNSGGPSAVTMRAAARMADLSPSSTVYYFDDHEELLA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
EAAKLNIRAWAHIAETIADEAENHRLKTGVDDVIEYLIRAMITRPAPLLGHYLELISAGD
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NETISNAYHAGRGRLNNAISRILAVANLPYPAELVIAVIDGGIVTALSEGRDPHATVEVL
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHH
LRQLISLPTHKAPMSQAPPTTD
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA