| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842100
Identifier: 50842100
GI number: 50842100
Start: 675252
End: 677426
Strand: Direct
Name: 50842100
Synonym: PPA0613
Alternate gene names: NA
Gene position: 675252-677426 (Clockwise)
Preceding gene: 50842099
Following gene: 50842101
Centisome position: 26.37
GC content: 62.16
Gene sequence:
>2175_bases GTGAAAGGTGTGCGTCTGGCGTTGCGATTGAGCCGTGGGGCGGGTCGTCATGAGCGGGTGCGATCGTTGGTCATGATTGT CGGTGTGGCCTTGGCCACACTCGGGTTAGCGGTGGGTGTCACCCTGCCTCGCGTCACCGCTCAGCAGCAGGAAGTGCGTG ACGCGCGTACCCCCATCCTTGCTCCGGATGAGCCTGCTGACGGGCATACCGGTTTCAAGGTGCAGGAATTACAGGTCGAC GGTACGCCCTGGACGAGTTTCGTGGTGAACCACCCTGCTGACCGCCTACCCCCAGGACTAAAGCACTGGCCCCAACCTGG TCACACCATCGTGTCCCCGCGTCTGAAGTCGTTGATGGACGCCGGGGTCGTGAACATCTCTAGCTTAGGCACAATCGATC CGGTGGTGGTGGATCGGGCCGCTTTGGCTTCACCCGATGAACTGTTCTCGATTACGACCACCTCCGATCAGGCTGGTTGC CGCGAGCTGAAGGCCTTCGGCTTGACCAGAATCGGTGATTCTGGGGTGTCGTCGCGTACCGTGTGGATCGAGGTGATCGG ACTGGTGGCGCTGCCGGCAGCCGTGTTGTTGTGGACGTCACTGAGCCTATCGGCTGCCTCGCGCCGCGACAGGTTCATGA CGTTGGTGCGCATGGGATGCGACCCCGACTGGTGTGGCCAGGTCTTCGCCGTCGAGGTTTCTGGGACCGCTGGCCTAGGC GCTCTGCTCGGGTTGGCACTGTTCATTCCCGTTCAAAACGCCCTTGGATCGAGTGGGACGCTCGGGTTAACGTGGTGGCC CTGGCAGGCGAGGCTGAGATGGCCTGAGTGGCTCATCATCGTCGTCATCATGGTGATCGCGAGTGGCTGGTTGGCCCGTC GCGCCCTGCGAAGGCTGCTGGCTTCACGCCGCCCCCCGCGCCGCCGTGCCCGGCTTGGGACAGTGCGTCATCTGCTCGGG ATCGTTGGTCTTCTCCTCGTGGTGGCTGCGATCGGTCTGGAGGGCTGGATCTGCCTGACGATGGCACTCGCCCACGACGG CCAGCGCCTGGGGGACCACGCCGCTGGATACATCATGGGCGCAGCGGTGTTTGGAACTCTCGGTGCCGTCATGTCAGCCC ACCTCATCATCGTATGGTGTGCCGGCCGTGAACAGCTGAGACTGCCCACCCGTCTTGGGTTGACCCTGGCTCGGGCTCAC TATCTAGATTCCGCTGCGATGGTGATCGCATTGACGATTATGGTCGGTCTAGCTGGATTTGGATCGGGATTCCTCGTTTC TGGCACCCACGATACTGCGGGGGACCCCCACCACGTCCTCGTCCAGGTCCCCTTCACCGACCGGACCGCCACCGAACAGC AAGCCCTCCGGCGCGTCACCCGGCCCCGACGTATGATCTACACGGCTACCGACGGTCGTACCCTCGTCGCGGCCTCCTGC GCTGACTTGGCCGCCTTCGATCCCTATCCGCGATCCTGTCCCAGGACGCCGGCAACGAGGCGAGACGCGTCATCGACATG GACCTTTGGCCACGATAAACACACCACGGTCCGTACCATCAAGCCCGTCAGCCGCCTACCCGTCACCTATGACGATGACG CCCTCCTCGCTCGCAACGATCCGAGACTGGCAGGTCTCACACCAGACATCCTGGAGTTCACCGCAGACTCCACAACTGGC GACCTCGATCGGCTTGTGGATCAACTCCACGGAGCTGCGCCGTCCTATGCGGCCTACGCCGGGGCCGAAAATCCCGACAC TCTACAGGCGTTTATCCAACAGCAGGGAATCGTGCGTAGCGGCCTGGCGGCCGGATTCCTGCTGATCCTGGTGGCATGTA CTGCAGCTTTTGTCGAATTGCGCTGGGGAATGCGGCGTACCATTGCCGTTCAACAAGCCGTGGGTACTCCCGCCCGTATC CTGCGAAGATCCTTCTTGATGCAGATGATCGTCACGATTCTGCCAGCCCAGACGATGTCACTGGTGGTTGGAGTTCTGGC TGGCTGGGCGATCAATGCCGCGATCGGATCGACCGACGCGAATCAATCCTTCGACCCCACCATTGCGGCGCTACCCGTCA CTATGTGGGCGGTCAGTGTGCTTGCCATTATGGTCACTGCGTTTGCGACTGGTGTGCCTCGTTTTCAGCTATCGGCTGTG AGGGATACCACGTAG
Upstream 100 bases:
>100_bases AGGGTTCCACTTTGGTGATGGTTACCCATGATGAACACACGTTGCCGGGAAATGCTCGGATCATTCGTTTGGCCGATGGG CGGATCGTGGGGGACGCGTC
Downstream 100 bases:
>100_bases ACAAGGAGCGATAGCCATGCGGTGCTCAAACTCCAGTACGGGGCAATTGCTGGTTGCCTGACGGAAGCGAAGGCGTCACG GTGTGAGAAGTGCCGGATGG
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MKGVRLALRLSRGAGRHERVRSLVMIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPILAPDEPADGHTGFKVQELQVD GTPWTSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMDAGVVNISSLGTIDPVVVDRAALASPDELFSITTTSDQAGC RELKAFGLTRIGDSGVSSRTVWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLG ALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLLASRRPPRRRARLGTVRHLLG IVGLLLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMGAAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAH YLDSAAMVIALTIMVGLAGFGSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASC ADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARNDPRLAGLTPDILEFTADSTTG DLDRLVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRSGLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARI LRRSFLMQMIVTILPAQTMSLVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFATGVPRFQLSAV RDTT
Sequences:
>Translated_724_residues MKGVRLALRLSRGAGRHERVRSLVMIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPILAPDEPADGHTGFKVQELQVD GTPWTSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMDAGVVNISSLGTIDPVVVDRAALASPDELFSITTTSDQAGC RELKAFGLTRIGDSGVSSRTVWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLG ALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLLASRRPPRRRARLGTVRHLLG IVGLLLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMGAAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAH YLDSAAMVIALTIMVGLAGFGSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASC ADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARNDPRLAGLTPDILEFTADSTTG DLDRLVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRSGLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARI LRRSFLMQMIVTILPAQTMSLVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFATGVPRFQLSAV RDTT >Mature_724_residues MKGVRLALRLSRGAGRHERVRSLVMIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPILAPDEPADGHTGFKVQELQVD GTPWTSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMDAGVVNISSLGTIDPVVVDRAALASPDELFSITTTSDQAGC RELKAFGLTRIGDSGVSSRTVWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLG ALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLLASRRPPRRRARLGTVRHLLG IVGLLLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMGAAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAH YLDSAAMVIALTIMVGLAGFGSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASC ADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARNDPRLAGLTPDILEFTADSTTG DLDRLVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRSGLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARI LRRSFLMQMIVTILPAQTMSLVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFATGVPRFQLSAV RDTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77706; Mature: 77706
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVRLALRLSRGAGRHERVRSLVMIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPIL CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC APDEPADGHTGFKVQELQVDGTPWTSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMD CCCCCCCCCCCCEEEEEEECCCCHHHHEECCCHHHCCCCCCCCCCCCCEECCHHHHHHHH AGVVNISSLGTIDPVVVDRAALASPDELFSITTTSDQAGCRELKAFGLTRIGDSGVSSRT CCCEEECCCCCCCHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHCCHHCCCCCCCCHH VWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH ALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLL HHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH ASRRPPRRRARLGTVRHLLGIVGLLLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAHYLDSAAMVIALTIMVGLAGF HHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASC CCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHH ADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARND HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECHHHHCCCEECCCCEEECCC PRLAGLTPDILEFTADSTTGDLDRLVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRS CCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHH GLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARILRRSFLMQMIVTILPAQTMS HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH LVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFATGVPRFQLSAV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC RDTT CCCC >Mature Secondary Structure MKGVRLALRLSRGAGRHERVRSLVMIVGVALATLGLAVGVTLPRVTAQQQEVRDARTPIL CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC APDEPADGHTGFKVQELQVDGTPWTSFVVNHPADRLPPGLKHWPQPGHTIVSPRLKSLMD CCCCCCCCCCCCEEEEEEECCCCHHHHEECCCHHHCCCCCCCCCCCCCEECCHHHHHHHH AGVVNISSLGTIDPVVVDRAALASPDELFSITTTSDQAGCRELKAFGLTRIGDSGVSSRT CCCEEECCCCCCCHHHHHHHHCCCCHHHEEEEECCCHHHHHHHHHHCCHHCCCCCCCCHH VWIEVIGLVALPAAVLLWTSLSLSAASRRDRFMTLVRMGCDPDWCGQVFAVEVSGTAGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH ALLGLALFIPVQNALGSSGTLGLTWWPWQARLRWPEWLIIVVIMVIASGWLARRALRRLL HHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH ASRRPPRRRARLGTVRHLLGIVGLLLVVAAIGLEGWICLTMALAHDGQRLGDHAAGYIMG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AAVFGTLGAVMSAHLIIVWCAGREQLRLPTRLGLTLARAHYLDSAAMVIALTIMVGLAGF HHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSGFLVSGTHDTAGDPHHVLVQVPFTDRTATEQQALRRVTRPRRMIYTATDGRTLVAASC CCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEHH ADLAAFDPYPRSCPRTPATRRDASSTWTFGHDKHTTVRTIKPVSRLPVTYDDDALLARND HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECHHHHCCCEECCCCEEECCC PRLAGLTPDILEFTADSTTGDLDRLVDQLHGAAPSYAAYAGAENPDTLQAFIQQQGIVRS CCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHH GLAAGFLLILVACTAAFVELRWGMRRTIAVQQAVGTPARILRRSFLMQMIVTILPAQTMS HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH LVVGVLAGWAINAAIGSTDANQSFDPTIAALPVTMWAVSVLAIMVTAFATGVPRFQLSAV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC RDTT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA