| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is purR [H]
Identifier: 50842089
GI number: 50842089
Start: 666300
End: 667298
Strand: Reverse
Name: purR [H]
Synonym: PPA0603
Alternate gene names: 50842089
Gene position: 667298-666300 (Counterclockwise)
Preceding gene: 50842098
Following gene: 50842088
Centisome position: 26.06
GC content: 62.06
Gene sequence:
>999_bases ATGTCATCAAGAGCAACCCTCAGCGACGTCGCCAAAGCATGCGGCGTCTCCTCGCAAACCGTCTCCCGGGCGCTCAACGA CAGTCCACTCGTCCGACCTGAGACCAGAGCCAAGGTCATGGCCGCCGTCGAGACCGTCGGATATGAACCAAACCTCGCCG CCCGCGCCCTCGCAGCTGGCGGATCACGGGCGGTTGGAATCTTGCTGACGACCCGTCTGACTCACGGCATGTCCACAACC TTCACCGCACTGGTAGGCACACTGCGGGAGCATAGTCGCCCATTCGTCCTCGACACCGCGATCGAGAATGACGAGGAATC CCTACGCGCCGCTCTGGCTCGACTCCGCGGCTACAGCGTCCAGGCAACCATCTTGCTGGCACAACGAGCCAAATCCGTTG CCATCGCATCCCAGCAACGCCACGGCGACAAGCTGGTCTCTGTCATCGCAGGGCACCCCGACTCCCCCGAGTCACCAATT GTCGCGATCGACCAAGCACTGGGAGCCCGTCTAGCCACTAAACACCTCATCGAACAGGGCTACCGGAATCTTCTCCATGT CCCTGGCGACCTGGAATGGCAGGACGCGTCAGAACGGCTTTCCTCCTACATCGCCGTCTGCAAAGAGGTCGGCATCGACC CTGCATGGATGCCAGCCAATTCCTGGGGAGCCGAAGCCGGGGCAGCCGTGGCTGAAGAACTTATCGCCGGACATCTCCCC GACGCGGTTCTCGCTGGCAACGATGACATCGCCATTGGCATGTGTCACACATTCCTCACTCATGGCGTGAGGATCCCCGA CGACATCGGCATTGTGGGATTCGACGACATCCCTCAAGCTCGCTGGATGACCCCATCCCTCACCACGGTCGTCCAGGACT TCGAAGCACTCGGACGCCAAGCAGTCGAGGCCGCGGAAGCCCTCATCGCTGGAGAGGCTCCGGAGTCGTGCCAGCTCTCC CCCACTTTGGCGGTGAGGCACTCGTCACGCCGGCACTAA
Upstream 100 bases:
>100_bases GTGAACCATTCAACCGTGCTTTTTGCAATAATGAGCATCATCGTCGATCGACCCGATCGACGTCGCTCAGCAGCCCCGCC CAACCTCCAGGTGAATCGCC
Downstream 100 bases:
>100_bases AGGACGTTCCAATATGAAGTTATATCCTGCTATGTATAATGATGCATTTTGCGGTGTCACTCCGACACCGAGCCCTCCCT CAATGCCAATATCATCAAGT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMAAVETVGYEPNLAARALAAGGSRAVGILLTTRLTHGMSTT FTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSVQATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPI VAIDQALGARLATKHLIEQGYRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQAVEAAEALIAGEAPESCQLS PTLAVRHSSRRH
Sequences:
>Translated_332_residues MSSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMAAVETVGYEPNLAARALAAGGSRAVGILLTTRLTHGMSTT FTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSVQATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPI VAIDQALGARLATKHLIEQGYRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQAVEAAEALIAGEAPESCQLS PTLAVRHSSRRH >Mature_331_residues SSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMAAVETVGYEPNLAARALAAGGSRAVGILLTTRLTHGMSTTF TALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSVQATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPIV AIDQALGARLATKHLIEQGYRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLPD AVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQAVEAAEALIAGEAPESCQLSP TLAVRHSSRRH
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787948, Length=332, Percent_Identity=28.6144578313253, Blast_Score=134, Evalue=9e-33, Organism=Escherichia coli, GI1790194, Length=330, Percent_Identity=28.7878787878788, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1788474, Length=337, Percent_Identity=30.2670623145401, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1789202, Length=335, Percent_Identity=31.9402985074627, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1786540, Length=335, Percent_Identity=29.2537313432836, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1790369, Length=302, Percent_Identity=28.8079470198675, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789068, Length=308, Percent_Identity=28.8961038961039, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1787580, Length=334, Percent_Identity=25.1497005988024, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI48994940, Length=341, Percent_Identity=26.3929618768328, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790715, Length=322, Percent_Identity=23.2919254658385, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 35209; Mature: 35078
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMAAVETVGYEPNLAARALAAG CCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC GSRAVGILLTTRLTHGMSTTFTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSV CCCEEEHEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHCCCCH QATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPIVAIDQALGARLATKHLIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH YRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP HHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQ CCEEECCCCEEHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHH AVEAAEALIAGEAPESCQLSPTLAVRHSSRRH HHHHHHHHHCCCCCCCCCCCCHHEECCCCCCC >Mature Secondary Structure SSRATLSDVAKACGVSSQTVSRALNDSPLVRPETRAKVMAAVETVGYEPNLAARALAAG CCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC GSRAVGILLTTRLTHGMSTTFTALVGTLREHSRPFVLDTAIENDEESLRAALARLRGYSV CCCEEEHEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHCCCCH QATILLAQRAKSVAIASQQRHGDKLVSVIAGHPDSPESPIVAIDQALGARLATKHLIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH YRNLLHVPGDLEWQDASERLSSYIAVCKEVGIDPAWMPANSWGAEAGAAVAEELIAGHLP HHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DAVLAGNDDIAIGMCHTFLTHGVRIPDDIGIVGFDDIPQARWMTPSLTTVVQDFEALGRQ CCEEECCCCEEHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHH AVEAAEALIAGEAPESCQLSPTLAVRHSSRRH HHHHHHHHHCCCCCCCCCCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA