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The map label for this gene is ybgJ [H]

Identifier: 50841772

GI number: 50841772

Start: 332920

End: 333540

Strand: Direct

Name: ybgJ [H]

Synonym: PPA0283

Alternate gene names: 50841772

Gene position: 332920-333540 (Clockwise)

Preceding gene: 50841771

Following gene: 50841773

Centisome position: 13.0

GC content: 60.39

Gene sequence:

>621_bases
ATGAGGTTGTTGCCGGCTGGACGGACGGCAGTGCTCGTCGAATTGGATGATGCCGGTCAGCGTCGTCGCCTGCATCGGAC
TTTGAGTGAGCATCCGGCGGTGGGAACGGTCGATCTCGTCCCGGCCCAGACGACGGTGCTCATCGACGTCGAGTCGCCCG
ATCAGTTACCGGCAGCTGTCGCTCACGTCCAGGAGTTTATCGCCGCAGGATTGGACTGCGTTGAACAAGGAGCGCGGGAA
ATCGTCGAGGTGCCAGTTCGCTATGACGGGCTGGACCTATCTGACGTGGCGGAATTGCTCAGTATGACCACGGACGAGTT
GGTGAAGCGCCACAGCGATCAGCAATGGACGGTGGAATTTGCCGGGTTCATGCCTGGATTTGGGTATATGTCCGGAGCTG
ATTGGCCGTACCGGATCCCGCGTCGGGATAGCCCTCGAACCAGGATTCCGCCGGGCAGTATCGCCTTGGCTGATGGATTC
ACCGGCGTCTACCCGCAAGCCTCCCCGGGCGGCTGGCAGATTATTGGCACGACTGACGCAATCTTGTGGGATGAGAAGGC
TGACCCGCCAGCTCTACTACTCCCGGGAGCCGTCATCAGATTCGAGGTGGTGGACTCATGA

Upstream 100 bases:

>100_bases
ATTCGGTGTGTGTTCATGGTGACACCCCGGGAGCTGTTGCGATGGCTACGGCAGTGCGTGATCGCCTTGCCTCCACCGGG
ATCGAACTGCGGGCTGCCGC

Downstream 100 bases:

>100_bases
CCCACTTCGTAGTGGAGACAGCCGGGCCGAGAACCCTCATTGAGGACGCTGGCCGTCGAGGCTGGGCGGATCTAGGAATC
AGTGGCTGCGGAGCATGGGA

Product: allophanate hydrolase subunit 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAVAHVQEFIAAGLDCVEQGARE
IVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEFAGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGF
TGVYPQASPGGWQIIGTTDAILWDEKADPPALLLPGAVIRFEVVDS

Sequences:

>Translated_206_residues
MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAVAHVQEFIAAGLDCVEQGARE
IVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEFAGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGF
TGVYPQASPGGWQIIGTTDAILWDEKADPPALLLPGAVIRFEVVDS
>Mature_206_residues
MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAVAHVQEFIAAGLDCVEQGARE
IVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEFAGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGF
TGVYPQASPGGWQIIGTTDAILWDEKADPPALLLPGAVIRFEVVDS

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=205, Percent_Identity=36.0975609756098, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 22424; Mature: 22424

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAV
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHH
AHVQEFIAAGLDCVEQGAREIVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEE
AGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGFTGVYPQASPGGWQIIGTTDA
ECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCE
ILWDEKADPPALLLPGAVIRFEVVDS
EEECCCCCCCEEEECCEEEEEEEECC
>Mature Secondary Structure
MRLLPAGRTAVLVELDDAGQRRRLHRTLSEHPAVGTVDLVPAQTTVLIDVESPDQLPAAV
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHH
AHVQEFIAAGLDCVEQGAREIVEVPVRYDGLDLSDVAELLSMTTDELVKRHSDQQWTVEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEE
AGFMPGFGYMSGADWPYRIPRRDSPRTRIPPGSIALADGFTGVYPQASPGGWQIIGTTDA
ECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCE
ILWDEKADPPALLLPGAVIRFEVVDS
EEECCCCCCCEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]