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The map label for this gene is ompA [H]

Identifier: 50841753

GI number: 50841753

Start: 316805

End: 317911

Strand: Direct

Name: ompA [H]

Synonym: PPA0263

Alternate gene names: 50841753

Gene position: 316805-317911 (Clockwise)

Preceding gene: 50841752

Following gene: 50841754

Centisome position: 12.37

GC content: 56.19

Gene sequence:

>1107_bases
ATGTGGAATTGGAAGATGAGGGCGGCAGGTTTTATTGGTGGGCTTGCTGTGGTGTTTGGTTTTGTGGCGTTACCGGCGCA
CTCTGATGAGAGTGTCACTGTGCCGGTGCCTCTGGTTGATGCGGTGGCGGTGAGCCATTATGAGTCGGCCAAGCGGCAGA
AGGAGAAGCCGGGGTCGGTGATTTTAGCGCTGCACGCCGTGCGGCGTCTTCCGTATGCCACGGTGGTGTACTACTCGGTG
TCGGTGGACGCTTCGGTGTCTGGCCCGCTTGAGGACTACGGGTACCTCGTCGGACGTGGCGGTGCTCAGGCACACTACAG
CGGAACCCTCAGTGCCGATGGTGCCGTTATCGATGTGGGGAATCATAAGCTGTATCGCACGATTGGTGACTTCCAGGGTT
GCAAGATGTGCGCTAGCGAGTGGTGGAATGGTGCACCGATATGGGAAATGGCTCCTGGGCATTCCCGGCTTGGTTGGTTT
AGTACTCCGCCGTTGCCTGCTGATGTGTCGCGGGTTGATGTCACGGTTGCTAATCGTATTTTTCATGATGTGCCGGTGGG
TGATGGGTTGTTGGGTCCCACTATTGATAAAGAGGCGGCGACGGGTCGCTGGAATAAGGGTATGCCGTTGGGTGTGGCTT
GGCCGGCACTGGATCCGAAGGATCTGGCTGGTGTCGATGTGTCGAAGTTCGTGAATGCGTTGGTGACTACGACTGGTGAT
GCTTCCGATGCTAGTCGTGAGCGGGTGACTAAGGAATCCATGAAGATTGATTTGGATGCCAGTGTGCTTTTTGATCTGGA
CTCTGATGTGGTTAAGCCGGCTGGTCGTCAGATCATTGACCGGACCGCTAAGCAACTTGTTGCTCGCAAGGTGTCGGGGA
AGATTGAGGTGACTGGCTATACCGATAGTAGCGGTTCTGCTTCTCATAATCTGGATCTTTCGCGTCGGCGGGCTGCGTCG
GTGGCCAAGGTCCTCGGATCGCAGCTATCCAAAGGGATCACCTTGGTTACAGCGGGTAAGGGGGAGGCTGATCCAGTGAC
CAGTAATGATTCGGAGGCTGGGCGCCGTTTGAACCGTCGGGTCACGATTACTGTCAAGGAGGGATGA

Upstream 100 bases:

>100_bases
GCAGCTTTGCGCTTAGTTATTAGTGTTCTCTAGTCAGGTGAGCCCTGGTTGTGGCTCGTGGGGCTTTGTTTGTGTGTGGG
ATTGGGTAGGTGTTGTGGGA

Downstream 100 bases:

>100_bases
TGAAGGGTCGTCCGGTTTTCGTTGGCTGTGTGGCTGTGTTGGTTTTGACGGCTTGTGGTGGTGCTGGTGTGTCTGCTGGG
TCGCATCCTCATACTGCTGT

Product: putative outer membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSVILALHAVRRLPYATVVYYSV
SVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVGNHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWF
STPPLPADVSRVDVTVANRIFHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD
ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAAS
VAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRRVTITVKEG

Sequences:

>Translated_368_residues
MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSVILALHAVRRLPYATVVYYSV
SVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVGNHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWF
STPPLPADVSRVDVTVANRIFHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD
ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAAS
VAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRRVTITVKEG
>Mature_368_residues
MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSVILALHAVRRLPYATVVYYSV
SVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVGNHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWF
STPPLPADVSRVDVTVANRIFHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD
ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDLSRRRAAS
VAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRRVTITVKEG

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=114, Percent_Identity=35.9649122807018, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 39182; Mature: 39182

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSV
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCE
ILALHAVRRLPYATVVYYSVSVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVG
EHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCEECCEECCCCCEEECC
NHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWFSTPPLPADVSRVDVTVANRI
CCEEEHHHHCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHEEHHHHHHH
FHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCHHHHHHHHHHCCCC
ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGY
CCCHHHHHHHHHHEEEECCCEEEEECCHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
TDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCE
VTITVKEG
EEEEEECC
>Mature Secondary Structure
MWNWKMRAAGFIGGLAVVFGFVALPAHSDESVTVPVPLVDAVAVSHYESAKRQKEKPGSV
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCE
ILALHAVRRLPYATVVYYSVSVDASVSGPLEDYGYLVGRGGAQAHYSGTLSADGAVIDVG
EHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCEECCEECCCCCEEECC
NHKLYRTIGDFQGCKMCASEWWNGAPIWEMAPGHSRLGWFSTPPLPADVSRVDVTVANRI
CCEEEHHHHCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHEEHHHHHHH
FHDVPVGDGLLGPTIDKEAATGRWNKGMPLGVAWPALDPKDLAGVDVSKFVNALVTTTGD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCCCHHHHHHHHHHCCCC
ASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGY
CCCHHHHHHHHHHEEEECCCEEEEECCHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
TDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCE
VTITVKEG
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]