| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841706
Identifier: 50841706
GI number: 50841706
Start: 265597
End: 266802
Strand: Direct
Name: 50841706
Synonym: PPA0214
Alternate gene names: NA
Gene position: 265597-266802 (Clockwise)
Preceding gene: 50841705
Following gene: 50841707
Centisome position: 10.37
GC content: 53.9
Gene sequence:
>1206_bases ATGACGTGGCATCTTCTGCTCCGACGGTCTTATGGCGTGCGTCTTGTGCCAGTAATGCTGCTCATGTGGTGGTATGGGGC ATTTGGGAACCCTCCGGCGCGTTCAGCTATTGAGCGGGCTTCCAGTATACTTTACGCATTCATGATGGTTGCGGGGCCTG TTGCGCTGAGTACTTGCTTGGAACTTCGGAGATTTACCGAAGGTCAGATTCTAAAGAGATTATCCAAGCGGTCTCGGCTG AGAATTGTGGCGCCGTGGTGGGAAATTGCTGTTCTTCCTTCTACAATAGCTGTAGGCGTTTTCGTTCTGCTTTCAGGATC TGGGGATCAAATTGTAAAAATGTCGTTGATTGGTGTTGTCTGGATGCTCGCGTGGGGTGTCTTTGGCGCCGTGATTGGAA TGTCATGGCCATTGGCATTATCGGCACCGACGGCTCTTTTGATCCCATTTATACTCGTTTTGTATGGACCGGCCGTATCG GTACTAGAAATGAGGTATCTGGTTGGCTATTACATGGACTGCTGTAATGCGGGGGAGATGCTAGATCCGCAAGTCCTTGC GGCCGGCATGACGATGGCGTGCGGTGTTCTTGTCGTGTCGATGGTGGCGTTTATTGCGAGTAGGGGGCGCCATCATTCAA GTGTCATCGTGACCGTGATCTTGATTATCGGGTTGGTCTCAACAGTGTTAATTGGGTTCCGTGAGGTGGAGGGTGTGGGT GCTTTTCCTGCCGTGCCTCGAACTGGAACGCAGACGTGTTTGAAGGATCCCACGGTGTGTACCTGGGATGCGCACGACCT CCAACTGCTGGGGCCCATAGTGCAGAAGGCAGATGCTGCGTGGAGGGCTAACGGGGTTCACGTTCCAAGGGCATACCGGC AGGGCATTGGGCAATCGACTCAAACAATCGTTTGGTGGTCGGCGTCGGCAGAGGATGTGTCTGAATCGGCATTACCCGCA CTATCGGCAGTCGCGGAGGGCCTGGCTGTTGCTCCATGCCAAGTTCGTCAAGACGAAGTGGAGACCTGGGTGGAAGATGT TCAGGAGCGTGTTGTCGCGTGGTTGGTGGAACATTCAGGCATCGAGGTGCGAGACACGGCATTATCCCCAGAGACTCGTG AGTGGTTGAAATCCATCGATCGGCTGCCGATCGAGAAGCAGGTCAGCATCATTGAACATGATCGAGCCCGGCTTCGGACA TGTTGA
Upstream 100 bases:
>100_bases ATGACGGATCTACCGATGAATTCCTCATGCATGGTGCGGGATCTTCTCACGCAGCAGAGGCGGCATTTCTTGATGTCGTG GGTGTATCGGAGCAGGCGCG
Downstream 100 bases:
>100_bases GCGGTAATGTGGTGCTGGGCTGGAGAGCCTGGGCTCGAAATCGATCCCTGTTATCTTTGCTTGCAGCGACTGTGGTTTGT TGTGTCCTCATCGGACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTWHLLLRRSYGVRLVPVMLLMWWYGAFGNPPARSAIERASSILYAFMMVAGPVALSTCLELRRFTEGQILKRLSKRSRL RIVAPWWEIAVLPSTIAVGVFVLLSGSGDQIVKMSLIGVVWMLAWGVFGAVIGMSWPLALSAPTALLIPFILVLYGPAVS VLEMRYLVGYYMDCCNAGEMLDPQVLAAGMTMACGVLVVSMVAFIASRGRHHSSVIVTVILIIGLVSTVLIGFREVEGVG AFPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIGQSTQTIVWWSASAEDVSESALPA LSAVAEGLAVAPCQVRQDEVETWVEDVQERVVAWLVEHSGIEVRDTALSPETREWLKSIDRLPIEKQVSIIEHDRARLRT C
Sequences:
>Translated_401_residues MTWHLLLRRSYGVRLVPVMLLMWWYGAFGNPPARSAIERASSILYAFMMVAGPVALSTCLELRRFTEGQILKRLSKRSRL RIVAPWWEIAVLPSTIAVGVFVLLSGSGDQIVKMSLIGVVWMLAWGVFGAVIGMSWPLALSAPTALLIPFILVLYGPAVS VLEMRYLVGYYMDCCNAGEMLDPQVLAAGMTMACGVLVVSMVAFIASRGRHHSSVIVTVILIIGLVSTVLIGFREVEGVG AFPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIGQSTQTIVWWSASAEDVSESALPA LSAVAEGLAVAPCQVRQDEVETWVEDVQERVVAWLVEHSGIEVRDTALSPETREWLKSIDRLPIEKQVSIIEHDRARLRT C >Mature_400_residues TWHLLLRRSYGVRLVPVMLLMWWYGAFGNPPARSAIERASSILYAFMMVAGPVALSTCLELRRFTEGQILKRLSKRSRLR IVAPWWEIAVLPSTIAVGVFVLLSGSGDQIVKMSLIGVVWMLAWGVFGAVIGMSWPLALSAPTALLIPFILVLYGPAVSV LEMRYLVGYYMDCCNAGEMLDPQVLAAGMTMACGVLVVSMVAFIASRGRHHSSVIVTVILIIGLVSTVLIGFREVEGVGA FPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIGQSTQTIVWWSASAEDVSESALPAL SAVAEGLAVAPCQVRQDEVETWVEDVQERVVAWLVEHSGIEVRDTALSPETREWLKSIDRLPIEKQVSIIEHDRARLRTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44016; Mature: 43885
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWHLLLRRSYGVRLVPVMLLMWWYGAFGNPPARSAIERASSILYAFMMVAGPVALSTCL CCCEEEEHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRRFTEGQILKRLSKRSRLRIVAPWWEIAVLPSTIAVGVFVLLSGSGDQIVKMSLIGVV HHHHCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH WMLAWGVFGAVIGMSWPLALSAPTALLIPFILVLYGPAVSVLEMRYLVGYYMDCCNAGEM HHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC LDPQVLAAGMTMACGVLVVSMVAFIASRGRHHSSVIVTVILIIGLVSTVLIGFREVEGVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIGQST CCCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCCCCCC QTIVWWSASAEDVSESALPALSAVAEGLAVAPCQVRQDEVETWVEDVQERVVAWLVEHSG CEEEEEECCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IEVRDTALSPETREWLKSIDRLPIEKQVSIIEHDRARLRTC CEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TWHLLLRRSYGVRLVPVMLLMWWYGAFGNPPARSAIERASSILYAFMMVAGPVALSTCL CCEEEEHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRRFTEGQILKRLSKRSRLRIVAPWWEIAVLPSTIAVGVFVLLSGSGDQIVKMSLIGVV HHHHCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH WMLAWGVFGAVIGMSWPLALSAPTALLIPFILVLYGPAVSVLEMRYLVGYYMDCCNAGEM HHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC LDPQVLAAGMTMACGVLVVSMVAFIASRGRHHSSVIVTVILIIGLVSTVLIGFREVEGVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFPAVPRTGTQTCLKDPTVCTWDAHDLQLLGPIVQKADAAWRANGVHVPRAYRQGIGQST CCCCCCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCCCCCC QTIVWWSASAEDVSESALPALSAVAEGLAVAPCQVRQDEVETWVEDVQERVVAWLVEHSG CEEEEEECCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IEVRDTALSPETREWLKSIDRLPIEKQVSIIEHDRARLRTC CEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA