| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841701
Identifier: 50841701
GI number: 50841701
Start: 258375
End: 261014
Strand: Direct
Name: 50841701
Synonym: PPA0209
Alternate gene names: NA
Gene position: 258375-261014 (Clockwise)
Preceding gene: 50841700
Following gene: 50841703
Centisome position: 10.09
GC content: 61.67
Gene sequence:
>2640_bases ATGTCAGCCCGGACCACGCCCGAGATGCCGACTAGCGCGGTTCGCCTCTCCGGAGACGCTATTGCCCGAGGACGGCCCCA CCGCCGTCTCATCAATCGCCTGGCCGTACGTGACATCGGCAGGCACAAGTTGCGCTCCCTACTTATCGTGATGCTCATAG CGTTACCGGTGGCCATCATGTCCGGATTAGGGGTGCTCCTGCGCTCGGATGGCAGTGTCTCCGGCAGCCAGGCCCTCAAT AACTATGGTGACGCCGACATGGTCATCAGCCCGATATCAAATTGGGATGGTCACTGTTCCCAGCAAGGGCCGACTAACAC GTACTGTGACGACGGTGCCGAGCCAGATGCGCACCAACGAGCCCAGCAACAGACGGCTCTGGCCAACCTGAGGCTGCCTG GCCACAAGCTGCACCCCTTGAGGACTACCGAGGCTAGCGTTTCCTGGCGGCTTGCCACCTTGTCGGCAACGGTTAAGGCG ATGGACCTGACGACTATGCGTCCCTACCGCATGGAGTTCCCGCGTGGCCCCATGCCTACCGGCAATAACATCTGGGTGAC CACCGGTGCTGCGAAAGATTATGGCTGGTCGGTGGGGTCCCGAGTAACCGTCAACGGGCACCGGTACACCATCACTGGGG TGGTCCGGGAAGAATGGCCGGGGAATGGTCCAACGTTCTGGGTAGCCCCTCGCAGCCCGTTGGCCCGTGGTGGAGAGCTC ACTTATTACGTCAACGGTGCATCGCTCACGAGGCAACAAGTCGAGAAGCTTAATGCGTCCGGGGTGGGCGTCGCCGACCG CCGTGCCGAAGAGAGTGCCAGTCAAGGAGACACCTTCGAACGGGACATGTTTGCGCTGATACTGGCCGCTGGGGTGCTCT CGGCTATTGTCGTAGCCACTATCGCAGCCGCAGCATTCGCTATTGGCGCTCGTCAACAGCGGCGGATGCTCGCTCTGCTC GGCATTACCGGGGCCGCTCGACGTGACCTCATGGGTGTGATGATTCATCAGGGACTGCTGTTGGGCCTGACGGGGGCCCT CCTCGGGGTGGGCCTCGGCGTGGGTATGGGCAATGGCGCGGTGGCCATTATTCGAATGGTGTACCCCGACTACATCACCT ATGGGGTCGATTGGGGATATGCCGCCGTCGGGTCCGTGGTCGGTCTGCTTGCGGCACTGACCGCTTGTTGGTTCCCGGCT CGTGACGTTGCCCGTCAAGACGCCCTCATGGGGGTCAAACATGCCGAATCTGCGGCACGGCCTGCGCGGCGACCAACGTT AGCGATCGTCATCGCGGCGATCGGTCTGCTCGCTGGTGTCGGTGGCGTCATATATGGCCGTCGTGGAACGACCGGCGACG TGATGGTGCGCCTGAATATTGGCATTATCGTCACCATTGTCGTGCTGTACCTGGCCGCTGTGTCTGCCATGCCCTGGTTG GTGGACAAGGTGTCGGGACGCAAATCGTCGCGGTTGCCGATCCGGTTCGCGCTGCGCGATCTTAACCGTAACCGAGGACG GGCGGTACCAGGGGTTGCCGCCTCCATGGCTATCACCGTGCTGGCATGCGCCGCCGTTACTTTTTGCGACAGTCTCGCCA TCCAGGACAAGGCCGAATACGTCCCGGAGTTCGGAGACCACATTGGGGTTCTCGCTGGTGAACACGATGACGAGGTCAGG ACTTCGGACGATCGTGTTGCCGGGGAGATCAAACGGGTCACTGCGGTTTTCGGGCCGCACGTGAAATATCTACGACCGGA GGAGCCGGTGACGTGCGGTCAGGACGGGAAGTACTGCACTAGCAGTCTCGAAGTCACCCCCAAAGTACCTAACGGAGCGA TGTCGTCGACGGTGGCCATCGACGACGGTACTCTGTATGAGCTGCTGACTGGGGAGAAGGCAGACGGCAGGGTGATGAAG GCTCTCGATGATGGAGTCGTCCTGTTCTCGCCCGATGCCACACGGGTTTCGCAGGCCATCATCTCCGACCATGATGAACG TCACAGTACCGGCACCACCGTGCTTCCAGCTATCCATGCTCCCCACCATGCCCTGGGATACGGTGTGCCCAATCTCATCA GCCGTAGAACGGCAGCCAAGGTGCTTGGGGTAAGCCCCGACAACGTGAAAACTCAATCCACAACGGTGTGGTTACGGTTG CCGCACATTCCGACCGCGAAGGAAGGGGACCGTCTGCAACATTCCCTCATGGACGTCACTGGGTCCTCCTCGGAGTTCAT ATGGGAGGAGGGGTACTCGGATGTTTTCGGGACCGTGATGCGCTGGTCGGCGGTAGTGGGCACGCTGTTGGCGGTATGCG TGGGCGCCGTGGTATTGGTCTTGACTCTGTCCGACTCGAGGGGGTCGCGCACCGCCATCGCGTCGGTAGGGGCGTCAAAG GCGACCTTGAGACGAATGGTGGCAGCACAGGCCCTCGTGACGACAGGGCTTGGTCAGGTCCTTGGCTTTCTCGTGGGGTT CGTGCCGGTTGCCGTTATGACGTGCGTCGGCCCCCGCTGGCCGATGCCAATGCCACTGCCGTGGCTGGCGCTCATCGTGT TCGCCCCGCCGGTGTTGCTGGCTTTAGTGACGATGGTCGCCGTACCAGTGCCGCGACCACGGATGCAGAGACTGGACTGA
Upstream 100 bases:
>100_bases GGGTGATTTTCCTGCGAGACGGAAGGCTCGTCGACGAGTCTCAGGTCGTCAGCGATCCTATGGAACTACTCAACGACAAC CCGAAACGTGGCCGGTGGTG
Downstream 100 bases:
>100_bases CGCCTACCGTGCCCAAGTTCCCGTCACAGTCGGGTCAGTCTCAGTGTTGTTGAGAGCTGGATGGTGCGGATCCGCCGGGG GCTGGGATCGCCGACGGCGC
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 878
Protein sequence:
>879_residues MSARTTPEMPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIMSGLGVLLRSDGSVSGSQALN NYGDADMVISPISNWDGHCSQQGPTNTYCDDGAEPDAHQRAQQQTALANLRLPGHKLHPLRTTEASVSWRLATLSATVKA MDLTTMRPYRMEFPRGPMPTGNNIWVTTGAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGEL TYYVNGASLTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVATIAAAAFAIGARQQRRMLALL GITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGAVAIIRMVYPDYITYGVDWGYAAVGSVVGLLAALTACWFPA RDVARQDALMGVKHAESAARPARRPTLAIVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWL VDKVSGRKSSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEYVPEFGDHIGVLAGEHDDEVR TSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCTSSLEVTPKVPNGAMSSTVAIDDGTLYELLTGEKADGRVMK ALDDGVVLFSPDATRVSQAIISDHDERHSTGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNVKTQSTTVWLRL PHIPTAKEGDRLQHSLMDVTGSSSEFIWEEGYSDVFGTVMRWSAVVGTLLAVCVGAVVLVLTLSDSRGSRTAIASVGASK ATLRRMVAAQALVTTGLGQVLGFLVGFVPVAVMTCVGPRWPMPMPLPWLALIVFAPPVLLALVTMVAVPVPRPRMQRLD
Sequences:
>Translated_879_residues MSARTTPEMPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIMSGLGVLLRSDGSVSGSQALN NYGDADMVISPISNWDGHCSQQGPTNTYCDDGAEPDAHQRAQQQTALANLRLPGHKLHPLRTTEASVSWRLATLSATVKA MDLTTMRPYRMEFPRGPMPTGNNIWVTTGAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGEL TYYVNGASLTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVATIAAAAFAIGARQQRRMLALL GITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGAVAIIRMVYPDYITYGVDWGYAAVGSVVGLLAALTACWFPA RDVARQDALMGVKHAESAARPARRPTLAIVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWL VDKVSGRKSSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEYVPEFGDHIGVLAGEHDDEVR TSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCTSSLEVTPKVPNGAMSSTVAIDDGTLYELLTGEKADGRVMK ALDDGVVLFSPDATRVSQAIISDHDERHSTGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNVKTQSTTVWLRL PHIPTAKEGDRLQHSLMDVTGSSSEFIWEEGYSDVFGTVMRWSAVVGTLLAVCVGAVVLVLTLSDSRGSRTAIASVGASK ATLRRMVAAQALVTTGLGQVLGFLVGFVPVAVMTCVGPRWPMPMPLPWLALIVFAPPVLLALVTMVAVPVPRPRMQRLD >Mature_878_residues SARTTPEMPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIMSGLGVLLRSDGSVSGSQALNN YGDADMVISPISNWDGHCSQQGPTNTYCDDGAEPDAHQRAQQQTALANLRLPGHKLHPLRTTEASVSWRLATLSATVKAM DLTTMRPYRMEFPRGPMPTGNNIWVTTGAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGELT YYVNGASLTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVATIAAAAFAIGARQQRRMLALLG ITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGAVAIIRMVYPDYITYGVDWGYAAVGSVVGLLAALTACWFPAR DVARQDALMGVKHAESAARPARRPTLAIVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWLV DKVSGRKSSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEYVPEFGDHIGVLAGEHDDEVRT SDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCTSSLEVTPKVPNGAMSSTVAIDDGTLYELLTGEKADGRVMKA LDDGVVLFSPDATRVSQAIISDHDERHSTGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNVKTQSTTVWLRLP HIPTAKEGDRLQHSLMDVTGSSSEFIWEEGYSDVFGTVMRWSAVVGTLLAVCVGAVVLVLTLSDSRGSRTAIASVGASKA TLRRMVAAQALVTTGLGQVLGFLVGFVPVAVMTCVGPRWPMPMPLPWLALIVFAPPVLLALVTMVAVPVPRPRMQRLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93573; Mature: 93441
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARTTPEMPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIM CCCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLGVLLRSDGSVSGSQALNNYGDADMVISPISNWDGHCSQQGPTNTYCDDGAEPDAHQR HCCCEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AQQQTALANLRLPGHKLHPLRTTEASVSWRLATLSATVKAMDLTTMRPYRMEFPRGPMPT HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHCCCCCCCCCC GNNIWVTTGAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGEL CCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCE TYYVNGASLTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVAT EEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IAAAAFAIGARQQRRMLALLGITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VAIIRMVYPDYITYGVDWGYAAVGSVVGLLAALTACWFPARDVARQDALMGVKHAESAAR EEEHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC PARRPTLAIVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWL CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH VDKVSGRKSSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEY HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VPEFGDHIGVLAGEHDDEVRTSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCT HHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEC SSLEVTPKVPNGAMSSTVAIDDGTLYELLTGEKADGRVMKALDDGVVLFSPDATRVSQAI CCCEEECCCCCCCCCCEEEECCCCEEHHHCCCCCCCHHHHHCCCCEEEECCCHHHHHHHH ISDHDERHSTGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNVKTQSTTVWLRL HHCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC PHIPTAKEGDRLQHSLMDVTGSSSEFIWEEGYSDVFGTVMRWSAVVGTLLAVCVGAVVLV CCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLSDSRGSRTAIASVGASKATLRRMVAAQALVTTGLGQVLGFLVGFVPVAVMTCVGPRW HEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PMPMPLPWLALIVFAPPVLLALVTMVAVPVPRPRMQRLD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC >Mature Secondary Structure SARTTPEMPTSAVRLSGDAIARGRPHRRLINRLAVRDIGRHKLRSLLIVMLIALPVAIM CCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGLGVLLRSDGSVSGSQALNNYGDADMVISPISNWDGHCSQQGPTNTYCDDGAEPDAHQR HCCCEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AQQQTALANLRLPGHKLHPLRTTEASVSWRLATLSATVKAMDLTTMRPYRMEFPRGPMPT HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHCCCCCCCCCC GNNIWVTTGAAKDYGWSVGSRVTVNGHRYTITGVVREEWPGNGPTFWVAPRSPLARGGEL CCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCE TYYVNGASLTRQQVEKLNASGVGVADRRAEESASQGDTFERDMFALILAAGVLSAIVVAT EEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH IAAAAFAIGARQQRRMLALLGITGAARRDLMGVMIHQGLLLGLTGALLGVGLGVGMGNGA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VAIIRMVYPDYITYGVDWGYAAVGSVVGLLAALTACWFPARDVARQDALMGVKHAESAAR EEEHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC PARRPTLAIVIAAIGLLAGVGGVIYGRRGTTGDVMVRLNIGIIVTIVVLYLAAVSAMPWL CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH VDKVSGRKSSRLPIRFALRDLNRNRGRAVPGVAASMAITVLACAAVTFCDSLAIQDKAEY HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VPEFGDHIGVLAGEHDDEVRTSDDRVAGEIKRVTAVFGPHVKYLRPEEPVTCGQDGKYCT HHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEC SSLEVTPKVPNGAMSSTVAIDDGTLYELLTGEKADGRVMKALDDGVVLFSPDATRVSQAI CCCEEECCCCCCCCCCEEEECCCCEEHHHCCCCCCCHHHHHCCCCEEEECCCHHHHHHHH ISDHDERHSTGTTVLPAIHAPHHALGYGVPNLISRRTAAKVLGVSPDNVKTQSTTVWLRL HHCCCCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC PHIPTAKEGDRLQHSLMDVTGSSSEFIWEEGYSDVFGTVMRWSAVVGTLLAVCVGAVVLV CCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLSDSRGSRTAIASVGASKATLRRMVAAQALVTTGLGQVLGFLVGFVPVAVMTCVGPRW HEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PMPMPLPWLALIVFAPPVLLALVTMVAVPVPRPRMQRLD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA