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The map label for this gene is yifB [C]

Identifier: 50841591

GI number: 50841591

Start: 117221

End: 118207

Strand: Reverse

Name: yifB [C]

Synonym: PPA0100

Alternate gene names: 50841591

Gene position: 118207-117221 (Counterclockwise)

Preceding gene: 50841592

Following gene: 50841590

Centisome position: 4.62

GC content: 65.15

Gene sequence:

>987_bases
ATGGCACAACGCCCCGTCTATCCCTTCTGCGCCATCGTCGGTCAGGAGGAGATGAAGCTGGCTCTCATCCTCGCTACCAT
CAGCCCCGATTTGTCCGGGGTACTTATCCGCGGCGAGAAAGGCACCGCCAAGTCCACCGCGGTGCGCGGACTAGCAGCCC
TACTGCCGCAACACCGGGAGATTCCCGGGCCCTACCACCTGTCCCCCGACGAGTACCCGACCCACGCGGTCGCACTCAAC
CTGCCTGAGGTCATGCCCGAGCCTCGCACCGTGCAGGTGCCGGTCGTCGAGCTGCCGGTGGGAGCCACTGAGGATCGCGT
CACCGGCACTCTCGACATGGAGACAGCCCTGCGGGAGGGGCGACGCCGTTTCGAGCCGGGTCTGCTAGCAGCCGCGCACC
GGGCGATCCTCTACGTCGACGAGGTCAACCTCCTCGACGACCACGTCGTTGACCTGCTGCTGGACTCAGCCGCCATGGGC
GTCAACACCGTAGAGCGAGAGGGGGTCAGCGTCACCCATCCAGCCCGGTTCACCCTGGTCGGCACCATGAATCCGGAGGA
GGGCGAACTGCGCCCCCAGTTGCTCGACCGCTTCGGGCTGTGCGTCACCGTCAGCGGGGAGGACGACCCGGACAAGCGCA
CCGAGGTAATCCGGCGCCGAATGGCCTTTGAGGACGACCCTGGTGGCTTCTCACGCACATGGGAACAGGATGGCCACAAG
CTCAGCGAACGGATCCAACGTGCTACTGAGCTCGTCACCCAGGTAGTCATCTCCGACGAAACTCTCACGACGGCGGCTCG
TACCTGCATCAACGCACACGTCGACGGTCACCGCGCCGACATCATGATGGTCCGGGCGGCGCGCACTCTGGCAGCCTGGA
ACGGTTGCACCGAGATCACCACAGAGGACCTCTCTCAAGCTGCCCGGCTCGTCCTGCCGCACCGGATGAGACGACAACCA
CTCGAGTCAGTTGGTAGGGCAGTGTGA

Upstream 100 bases:

>100_bases
GGACCTTGTCTGCGCATCGACGACCTGCGGGCTGACGACCTCGTCAACGTCGTCTCTCGACTTGACCCCTCCCACCAATC
TCCCCGAAAGGACCGCTGAC

Downstream 100 bases:

>100_bases
TACGCACCCCACGCCGACACTGGCATCCGAAACTGGGCTGGCTTCCGCACATCCCCCGGCAAACCCCACCGCCCATTGAC
GCCCCTCTGATCGACGTCAC

Product: magnesium-chelatase subunit ChlI

Products: ADP; phosphate; Mg-protoporphyrin IX; H+

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MAQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHREIPGPYHLSPDEYPTHAVALN
LPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREGRRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMG
VNTVEREGVSVTHPARFTLVGTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK
LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEITTEDLSQAARLVLPHRMRRQP
LESVGRAV

Sequences:

>Translated_328_residues
MAQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHREIPGPYHLSPDEYPTHAVALN
LPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREGRRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMG
VNTVEREGVSVTHPARFTLVGTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK
LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEITTEDLSQAARLVLPHRMRRQP
LESVGRAV
>Mature_327_residues
AQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHREIPGPYHLSPDEYPTHAVALNL
PEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREGRRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMGV
NTVEREGVSVTHPARFTLVGTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHKL
SERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEITTEDLSQAARLVLPHRMRRQPL
ESVGRAV

Specific function: Unknown

COG id: COG1239

COG function: function code H; Mg-chelatase subunit ChlI

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000523 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: 6.6.1.1

Molecular weight: Translated: 36122; Mature: 35991

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHRE
CCCCCCCHHHHHCCCCHHEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHCC
IPGPYHLSPDEYPTHAVALNLPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREG
CCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEEEEECCCCCCCCCEEEECHHHHHHHH
RRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMGVNTVEREGVSVTHPARFTLV
HHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCEEEEE
GTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK
ECCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEIT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHCCCCCCC
TEDLSQAARLVLPHRMRRQPLESVGRAV
HHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
AQRPVYPFCAIVGQEEMKLALILATISPDLSGVLIRGEKGTAKSTAVRGLAALLPQHRE
CCCCCCHHHHHCCCCHHEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHCC
IPGPYHLSPDEYPTHAVALNLPEVMPEPRTVQVPVVELPVGATEDRVTGTLDMETALREG
CCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEEEEEECCCCCCCCCEEEECHHHHHHHH
RRRFEPGLLAAAHRAILYVDEVNLLDDHVVDLLLDSAAMGVNTVEREGVSVTHPARFTLV
HHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEECCCEEEEE
GTMNPEEGELRPQLLDRFGLCVTVSGEDDPDKRTEVIRRRMAFEDDPGGFSRTWEQDGHK
ECCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LSERIQRATELVTQVVISDETLTTAARTCINAHVDGHRADIMMVRAARTLAAWNGCTEIT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHCCCCCCC
TEDLSQAARLVLPHRMRRQPLESVGRAV
HHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; protoporphyrin IX; Mg2+; H2O

Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]