| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841556
Identifier: 50841556
GI number: 50841556
Start: 66444
End: 67739
Strand: Direct
Name: 50841556
Synonym: PPA0065
Alternate gene names: NA
Gene position: 66444-67739 (Clockwise)
Preceding gene: 50841555
Following gene: 50841558
Centisome position: 2.6
GC content: 63.5
Gene sequence:
>1296_bases ATGAGGGCGTGCGAGCTGACACCTGCCCTACGGCAGCGTCTAGACGAGATCGGTGCCAAGATCAGCCAGGGCGTAGGCAA GGGCCTTGACGAGGCGATGGGCCGGCAGGCTGCAAGCCGATTCGTGGCCTGGATGACGGACACGTGGACGCGCACTATGT CCCGCGACGAGCACGGCGTCTTCGTCGTCACTGGCGATATTCCGGCTATGTGGCTGCGCGACTCCTCGGCGCAGTTGTGG CCGTTCCTGATTATGTGCGACCTCCCCGAGGTGACTCGTCAGATCGGCGACGTTATCGCCCGCCAGTGGCACTGCATCGA CGTTGACCCCTACGCCAACGCCTTCAATTCCGGCCCAACCGGGGCGCACTTCGACGCCGATGACCTCGATGTGGCCGACG AGCTATGGGAGCGCAAATACGAGGTGGACTCGCTGGCGTTCCCCGTCGACCTGGCATGGCGGTACTGGCAGGCCACCGGC AGCCCGGAGCATCTGAACGGTGCGGTCCACCAGGGGTGCATACGCATTATCGACGTCTGGAGCCTGGAGCAGGATCATGC GCGGTCTACCTACCGCCATGTGCGCCCCGCCGAGCCGTCCGACACCCTCGGCCGCGACGGTTCGGGCACTCCGGTGGGAC ACACCGGGATGACCTGGAGCGGGTTCCGCCCTTCCGACGACGCCTGCCGCTACGGCTACAACATTCCGGCTCAGTTCATG GCGATGCGTGCCCTGCGTCAAATTCGCGAGTTCTGTCGCGTCTGGGATGACGAGGATCTTGTCGAACGCGCCACGAAGCT GGCCGATGAGATCGATGCCGGGGTGAGGCAATTCGGCATCGTCGAGGACCACCTTGCCTACGAGGTGGACGGGCTTGGAT CAGTGCTGGAAATGGACGACGCGAACATGCCTTCCCTGTTGTCTTTGCCTCTCACCAGTGACCTCGGTCGTGACGATCCG CTCTACCAGAGCACCCGCCGCTGGGTGCTCAGCGCGGCTAACCCGTACCTGTTCAGTGGCCCGGCAGCCCGGGGAATTGG TAGCCCGCACAGTCCAAAGGGCTATATCTGGCACATTGGTTTGGCGGTGCAGGGACTCACTGGGGACGATGCGGAGGCCC GCGACTGCCTGGAGACGATCCTCGCCACCGATGGTGGTACTGGCTGGACCCACGAGAGCTTCGATCCAACCGACCCTACT CGGTTCACCCGAGGGTGGTTCAGTTGGTCGAACTCGATGGCCTGCCTGCTCATGATGAACGTGGCCGGTATCGATGCCAT TATCGGTGCCAATTGA
Upstream 100 bases:
>100_bases GAGCGTGGGTTCTCACGGTCGGACGCAGACTCAAGGGCCAGGGGGACATGTGGGTTTCCGGGCTGGACGATGAGCGGGTG ACCTCCTGGGAACCCCATCG
Downstream 100 bases:
>100_bases CCCCCATCGCGGTGAGACGGCGAGTTTGGGCCTCTAATTCCGACAGCGGTCGAGCCGGGTTGCCAGTCCACAACTGTTCG GCGATCGACGTGCCGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGVFVVTGDIPAMWLRDSSAQLW PFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPTGAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATG SPEHLNGAVHQGCIRIIDVWSLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDDANMPSLLSLPLTSDLGRDDP LYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIGLAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPT RFTRGWFSWSNSMACLLMMNVAGIDAIIGAN
Sequences:
>Translated_431_residues MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGVFVVTGDIPAMWLRDSSAQLW PFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPTGAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATG SPEHLNGAVHQGCIRIIDVWSLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDDANMPSLLSLPLTSDLGRDDP LYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIGLAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPT RFTRGWFSWSNSMACLLMMNVAGIDAIIGAN >Mature_431_residues MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGVFVVTGDIPAMWLRDSSAQLW PFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPTGAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATG SPEHLNGAVHQGCIRIIDVWSLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDDANMPSLLSLPLTSDLGRDDP LYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIGLAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPT RFTRGWFSWSNSMACLLMMNVAGIDAIIGAN
Specific function: Unknown
COG id: COG3538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47887; Mature: 47887
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGV CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FVVTGDIPAMWLRDSSAQLWPFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPT EEEECCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCC GAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATGSPEHLNGAVHQGCIRIIDVW CCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHH SLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHH AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCC ANMPSLLSLPLTSDLGRDDPLYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIG CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEE LAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPTRFTRGWFSWSNSMACLLMMN EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHH VAGIDAIIGAN HHCCCHHHCCC >Mature Secondary Structure MRACELTPALRQRLDEIGAKISQGVGKGLDEAMGRQAASRFVAWMTDTWTRTMSRDEHGV CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FVVTGDIPAMWLRDSSAQLWPFLIMCDLPEVTRQIGDVIARQWHCIDVDPYANAFNSGPT EEEECCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCC GAHFDADDLDVADELWERKYEVDSLAFPVDLAWRYWQATGSPEHLNGAVHQGCIRIIDVW CCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHH SLEQDHARSTYRHVRPAEPSDTLGRDGSGTPVGHTGMTWSGFRPSDDACRYGYNIPAQFM CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHH AMRALRQIREFCRVWDDEDLVERATKLADEIDAGVRQFGIVEDHLAYEVDGLGSVLEMDD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCC ANMPSLLSLPLTSDLGRDDPLYQSTRRWVLSAANPYLFSGPAARGIGSPHSPKGYIWHIG CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEE LAVQGLTGDDAEARDCLETILATDGGTGWTHESFDPTDPTRFTRGWFSWSNSMACLLMMN EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHH VAGIDAIIGAN HHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA