| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841554
Identifier: 50841554
GI number: 50841554
Start: 64754
End: 65809
Strand: Direct
Name: 50841554
Synonym: PPA0063
Alternate gene names: NA
Gene position: 64754-65809 (Clockwise)
Preceding gene: 50841553
Following gene: 50841555
Centisome position: 2.53
GC content: 66.67
Gene sequence:
>1056_bases ATGAAACTTCTCCTGGTGTGCATCGACGGGTTGCGCCTCGACATCGCATTGCCTGAGGCATTGCAACGCGATCCGGGATT CACCCACCCCGATCACCCCGCCGATCCCCGATTCGTGCGGGGCGTGGGGCAGGGCGAGCCGGTCCCCGAGCATCCGGCGC CGGCCCTGGACCACACCCTGCCCGTCGATCGAGCCCCGAAGAACCTGGCTCCGACCCTCGCTCGCCTGGTGCGAGGGGAT GACCGCTCCCAGGGCACGATCATCCCCATGTGGATGACCCCGCCCACCGACTCTGCCCCCGGCTGGACGACGATCCTCAC CGGCGCCACCCACGAGCAGTGCAATGTGTGGTGGAACGAGTTCGTCGGCCACGATCTGGCACGTCACCCTGACATCCTCT CCCAGGTGTTCTTCGCCAACCCATCGGCGCGCACCCTCGCCGCAGCTACCTGGGACGCCTTCGTGAGCCCCTACGGGCCC GGCCCGATCATTCACCAGCGGGTGGACCAACAGCGCACCGGACAGCACCAGCTCTTCGGCCCCGACCTTTCCCAAGGCAT CGACCGGGCTGATGAGCAAGTGTCGTCGTGGGCCGCCTGGCATCTGCTGCACGAGGGCCCGGACGCCGCCGTCGTCTACT TCGAGGGGGTCGACCACGCCGGACACAGTTTCGGGGCGGACTCCGAGCAGTACCAGCAGGCAGTGGGGCATGTCGACGAG CTCACCCGTCACCTTGTCAAGGCCGTCGCCGAGCGCCACGAGCAGCTCGGGGAGCAGTGGCTTGTCGCCGTCACCACCGA TCACGGTCACAAACCCGAAGGGGGTCACGGGGAAGACGAGGTGGAGGTACGTCGCAGCTTCCTGGCAGCCCACCACATCG GTGGGACGCTTCCCGAGCCGTTGCTGCGTACCGCTGCCCTTCGCAGCCACGAGGTGACGCCGCTGCTACTGCAGGCAATG GGAGTGCACCCTGGCCATATGGACGCCAGCGACGTCGGCGTCTTGCGTGACGTGGAACCGATCGGCCCAAGTAGAGAGAT GGATTTTGAATGGTGA
Upstream 100 bases:
>100_bases CGATTGACGAGCCGACCCAACAACTGCCGGCCAGCACCTGCAGCAGGGTGGAACTCACCCTGCGTCCCTTCCAGATTCTG ACACTGAGAGTGAGCCAGCG
Downstream 100 bases:
>100_bases CGATGTACCCGCCGCAGCAAGTGGATGCCGTCCTCTTTGACATGGACGGAACCCTGCTCAACACCCTGTCGGCCTGGTGC GTGGCATCCGAGCATCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotide Pyrophosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Phosphodiesterase; AP Superfamily Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTLPVDRAPKNLAPTLARLVRGD DRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNEFVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGP GPIIHQRVDQQRTGQHQLFGPDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEPLLRTAALRSHEVTPLLLQAM GVHPGHMDASDVGVLRDVEPIGPSREMDFEW
Sequences:
>Translated_351_residues MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTLPVDRAPKNLAPTLARLVRGD DRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNEFVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGP GPIIHQRVDQQRTGQHQLFGPDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEPLLRTAALRSHEVTPLLLQAM GVHPGHMDASDVGVLRDVEPIGPSREMDFEW >Mature_351_residues MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTLPVDRAPKNLAPTLARLVRGD DRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNEFVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGP GPIIHQRVDQQRTGQHQLFGPDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEPLLRTAALRSHEVTPLLLQAM GVHPGHMDASDVGVLRDVEPIGPSREMDFEW
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38585; Mature: 38585
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTL CEEEEEEECCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC PVDRAPKNLAPTLARLVRGDDRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNE CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHH FVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGPGPIIHQRVDQQRTGQHQLFG HHCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEP HHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH LLRTAALRSHEVTPLLLQAMGVHPGHMDASDVGVLRDVEPIGPSREMDFEW HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKLLLVCIDGLRLDIALPEALQRDPGFTHPDHPADPRFVRGVGQGEPVPEHPAPALDHTL CEEEEEEECCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC PVDRAPKNLAPTLARLVRGDDRSQGTIIPMWMTPPTDSAPGWTTILTGATHEQCNVWWNE CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHH FVGHDLARHPDILSQVFFANPSARTLAAATWDAFVSPYGPGPIIHQRVDQQRTGQHQLFG HHCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PDLSQGIDRADEQVSSWAAWHLLHEGPDAAVVYFEGVDHAGHSFGADSEQYQQAVGHVDE CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH LTRHLVKAVAERHEQLGEQWLVAVTTDHGHKPEGGHGEDEVEVRRSFLAAHHIGGTLPEP HHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH LLRTAALRSHEVTPLLLQAMGVHPGHMDASDVGVLRDVEPIGPSREMDFEW HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA