| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is ybjZ [C]
Identifier: 50841543
GI number: 50841543
Start: 51068
End: 53539
Strand: Reverse
Name: ybjZ [C]
Synonym: PPA0053
Alternate gene names: 50841543
Gene position: 53539-51068 (Counterclockwise)
Preceding gene: 50841544
Following gene: 50841542
Centisome position: 2.09
GC content: 59.95
Gene sequence:
>2472_bases ATGTTCACTGAGGCTCTCAGAGAGCTGCGTCACCATCCCGGTCGGTTGGTCGCAACCCTCATTGCCATTGCAGTGTCGGT TGGGTTCCTCGTTGGTATCTCGATGTTCGTACGTACCCAGGGTGTGGCGCTGGGCAAGGAACAGGCCGTTGCCACCTCGA AGGCCGACGTTGTCGTCGACACCGGCGGAGCGGTTGCCGACCCCGATGAGGTCACCCGAACTATCAAAGAAACCCAGGGG GTCGCGGCTGTTGACACCGTGCTGTCGACGTCCATGCCGGCAGCCCACGGACATGATTCGGTGATGATCGACCTCCACCA GGTTCCGGCAGAGCCCTTCCGCTGGTCGACGGTCAAGGACGGGTCCTGGCCGTCGAAGGCCGACGAGGTCGCTCTGTCCG AAGATGCTGCCAAGCGACTCCAGGCCAGCATCGGCGATACCGTTGCGTTCAGCGGTCATGACCTCAAGGTGGTCGGCATC ACCGACGACCCCTCGGCTCTGCAAACTGCTCCGGCTTATGTGGGCCAACTTCCCGGCCAAACCCCCGATACCTGGGTCGT CAAGGCCAAGGATGGGACGGCGCCGGGACAACTCGTCACCAACCTCGAGAAGACCCTGCCGAAGATTAAGGACGCACCGC AGTTCAATAAAGACGACGCCGGCGCCACGATCTCGACGGCTGACTCTTTCCAGAAGAAAACCATCAATAGTCTGACTGAG GACTTCGATGTCACCAAGTACATGCTTATGGTCTTTGGTGCTATCGCCCTGTTAGTGGGAGCGATTATTATCACGACGAC CTTTCTCATTCTGTTGGCTCAGCGACGTCGCCAGATCGGCCTCATGAGGGCTGTTGGAGCGTCGAGCGGCCAAGTGAGAC GACGAGTCCTCGCCGAGGCGATCGTGCTCGGCGTCCTTGGATCGATGCTGGGGGTCGTGCTTGGCATCCTGTTGACCGTT GCCGGCACGGCTTATACCGGGGCTTTAGCCTTCGGGTTAGCCTGGCCGTGGGGTGACATTATCGTCGAGTTCCTCATCGG CATCGTCATCACTGTGTTGGCGGCCTTCCTGCCGGCACTGCGGGCAACTCGAGTGGCACCATTGGAGGCACTGCGCCCAG TACCGACCGTGGAACAGAAACGTCGCATCGGTATTGCGAGGATCGTCGTCTGCTCCCTGCTTGCAGTGGCTGGAATTGCG CTATCTGTGGGGGCCATCGTCGGAACCGGTACATCAATCATCACGATGGCAATTCTGTCAGCAATGTGTCTGTCTCTAAC TTTGCTCATCGCGACCCCGCTGTACGTGCCGTGGTTGATCCGTGCCATGGGATTCCTGCTGCGACCTCTCGGGCCCACAG CACGGCTATCAACCTCAAACGCCAACCGCAACCCGACTCGCACTTCTCTGACTGCGGTGGCCCTTATGTTGGCTATCGGT TTGTCGGTGACCTTACAGGTGGGCATCTCGACGACGCGCACGACGGTCATGGACCAAATCAACGAGCACTTCCCGATCGA CCTCACCCTCACGAACCGCCCCTCTTACGACCCAAATACCGGCCAGGAGACGGCGAGCACGCTCGACACGTCAGCCCTAA AGACGGTGCAGGACCTGCCGAACGTCAAGGACTCCATCGTCCTCAAAGGTGGGTTCGCCGAGAGTGATCTGTCCCCTCAC GCCCATATGTTGTCCGGAAACCCTGACGAGATCGCCAAGGTGGCACCCTCCATCGCCAAGGAGATGAAGCCGGGGGTCGC ACTGATAACTTCCATAGACAACCCGCCGCAGACTATGACCTTCACCTCTTCCAAAGGCAAAGTGACTCTCAAGGTCACGA AGGTCCACGGGCTTTCTGAAGGCGACGTCGTGGTCAATCAAGAGGACTTGAAGAGGATCGTGCCTTCCGTGACTGACCAG TCCATCTGGGTCCACCTGGACGACCGCAGCAATTTGGCCTCCACTCTGACGGTGATGATGTCCATGTCGAGCAGTAGTTC GCAGCATATGGACATCGGTGGAGGCGCCCTCATCGGCGGAATCGTCGAGCTGATCCTCAAGGTCCTGCTGATGGTGATGA CGGCCCTGCTCGGTGTGGCGGTGCTCATCGCCCTCATCGGCGTGGCCAATACCTTGAGCCTGTCCGTGCTGGAGCGGCGT CGGGAATCTGCGCTGTTGCGGGCTATGGGCATGCAGCGGCGTGGATTGAGGTTGATGCTGCTGTACGAATCGATCCAGGT CGGAATGGCCGGCGTCATCGTGGGAATAGTTGCTGGGTTCTACTTCGCCTGGCTGGGCATTCGGTCGGTGTTCCGCGTCG CCTCGGACACCATCCCTGTGCACTTCTCGATCGATTGGCCATGGACCCTCAGTCTCATCGCGATCTGCCTGGTGGCGGCA TGCCTGGCCTCGGTGTTGCCGGGCAGACGAGCCGCCAAAGCGATTCCAACCGAGGCGCTCGCCGACGAGTGA
Upstream 100 bases:
>100_bases CCGACCGCGCCCTCATGTTGTTAGACGGTCGCATCGTCGACGACATTGCCTCCCCCACCGCCGAATCGGTGAGCGAGGCA ATGGCCGGATTGGAGGGCTG
Downstream 100 bases:
>100_bases GACCTTGTGCGGGAAGCCGTGAACCGGCCGTGTCCTTCGGGGCACGGCCGGTTTTCGCAGCGATTCATCGGACAACACCA GACGAGATAGAGGCAACACC
Product: ABC transporter associated permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVDTGGAVADPDEVTRTIKETQG VAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKDGSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGI TDDPSALQTAPAYVGQLPGQTPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEAIVLGVLGSMLGVVLGILLTV AGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPALRATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIA LSVGAIVGTGTSIITMAILSAMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLPNVKDSIVLKGGFAESDLSPH AHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMTFTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQ SIWVHLDDRSNLASTLTVMMSMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPVHFSIDWPWTLSLIAICLVAA CLASVLPGRRAAKAIPTEALADE
Sequences:
>Translated_823_residues MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVDTGGAVADPDEVTRTIKETQG VAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKDGSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGI TDDPSALQTAPAYVGQLPGQTPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEAIVLGVLGSMLGVVLGILLTV AGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPALRATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIA LSVGAIVGTGTSIITMAILSAMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLPNVKDSIVLKGGFAESDLSPH AHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMTFTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQ SIWVHLDDRSNLASTLTVMMSMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPVHFSIDWPWTLSLIAICLVAA CLASVLPGRRAAKAIPTEALADE >Mature_823_residues MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVDTGGAVADPDEVTRTIKETQG VAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKDGSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGI TDDPSALQTAPAYVGQLPGQTPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEAIVLGVLGSMLGVVLGILLTV AGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPALRATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIA LSVGAIVGTGTSIITMAILSAMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLPNVKDSIVLKGGFAESDLSPH AHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMTFTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQ SIWVHLDDRSNLASTLTVMMSMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPVHFSIDWPWTLSLIAICLVAA CLASVLPGRRAAKAIPTEALADE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 87108; Mature: 87108
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVD CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEE TGGAVADPDEVTRTIKETQGVAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKD CCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC GSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGITDDPSALQTAPAYVGQLPGQ CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCC TPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHH DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVLGVLGSMLGVVLGILLTVAGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPAL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIALSVGAIVGTGTSIITMAILS HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLP CCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NVKDSIVLKGGFAESDLSPHAHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMT CCCCCEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE FTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQSIWVHLDDRSNLASTLTVMM EECCCCEEEEEEEEECCCCCCCEEECHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH SMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPV HHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE HFSIDWPWTLSLIAICLVAACLASVLPGRRAAKAIPTEALADE EEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC >Mature Secondary Structure MFTEALRELRHHPGRLVATLIAIAVSVGFLVGISMFVRTQGVALGKEQAVATSKADVVVD CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEE TGGAVADPDEVTRTIKETQGVAAVDTVLSTSMPAAHGHDSVMIDLHQVPAEPFRWSTVKD CCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC GSWPSKADEVALSEDAAKRLQASIGDTVAFSGHDLKVVGITDDPSALQTAPAYVGQLPGQ CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCC TPDTWVVKAKDGTAPGQLVTNLEKTLPKIKDAPQFNKDDAGATISTADSFQKKTINSLTE CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHH DFDVTKYMLMVFGAIALLVGAIIITTTFLILLAQRRRQIGLMRAVGASSGQVRRRVLAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVLGVLGSMLGVVLGILLTVAGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPAL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RATRVAPLEALRPVPTVEQKRRIGIARIVVCSLLAVAGIALSVGAIVGTGTSIITMAILS HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AMCLSLTLLIATPLYVPWLIRAMGFLLRPLGPTARLSTSNANRNPTRTSLTAVALMLAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC LSVTLQVGISTTRTTVMDQINEHFPIDLTLTNRPSYDPNTGQETASTLDTSALKTVQDLP CCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NVKDSIVLKGGFAESDLSPHAHMLSGNPDEIAKVAPSIAKEMKPGVALITSIDNPPQTMT CCCCCEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEE FTSSKGKVTLKVTKVHGLSEGDVVVNQEDLKRIVPSVTDQSIWVHLDDRSNLASTLTVMM EECCCCEEEEEEEEECCCCCCCEEECHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHH SMSSSSSQHMDIGGGALIGGIVELILKVLLMVMTALLGVAVLIALIGVANTLSLSVLERR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RESALLRAMGMQRRGLRLMLLYESIQVGMAGVIVGIVAGFYFAWLGIRSVFRVASDTIPV HHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE HFSIDWPWTLSLIAICLVAACLASVLPGRRAAKAIPTEALADE EEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]