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The map label for this gene is 50841532

Identifier: 50841532

GI number: 50841532

Start: 38497

End: 39975

Strand: Direct

Name: 50841532

Synonym: PPA0041

Alternate gene names: NA

Gene position: 38497-39975 (Clockwise)

Preceding gene: 50841531

Following gene: 50841533

Centisome position: 1.5

GC content: 61.19

Gene sequence:

>1479_bases
ATGACGATCGACCATGCAGTAAGCCGATATGCACAGGACGCTCCGGTAGTCCCGCTCGATGATGGGAAGGACCTTGCCGG
TGTGCTTTCCCGCATCTCCCCATCGCCACACGTATCGCCGGCAGCTGTGTCTCCTCGTCCCAACCCACGACGATTCGAGG
CGAAGGACATTGATTGGCGTACCGTCGTTTCATTGCGTCGGAAGGCATCTGAACGTATCTCGTCGGAACGGGCGTCCCAT
CGGGAACGTACCGGCGTCGACCTGAGCGGCGATGATGTGCGAATGCTTGGCCGGTCGATCGTGCGGCAGGCTGTCGAGTC
CCACGCGGAGAAATTGACGGCTGAGGGGCAAGCCCTGTGGAGCGCGCAGACTAAAGACGCGTACGTCCGCGCGGTCATGG
ATGCCATCTTTGGGTACGGGCGGCTACAGCCTCTTTTCGAAATCCAAGACGCGGAGAATATTGAAATCAATGGCTGCGAC
CGGGTCTTTGTGCAGTACGGGGATGGACGACGCGAACCTGGTCCCGTAGTGGCCGACGATGACGCTGAGCTCGTCGAGGC
GATTCGGTTCCTCGGGGAGTCGGCTAACCCGCCTCGGCCTTTTGACGACGCTCACCCCACTATGACAGTGGCGTTGGGAT
CCCAATATCGACTGCACGCTATCGGGTTTGGGCTGTCCTACCGGCCCTCGGTCGTCATTCGCCACCACACCCTGACGAGG
GTGACGATCGACGACCTCGTCAATACCGCGATGATGCCCCACCACGTCGGGGTGTTGCTACGTGCGGCCGTCCTGGCGCG
TCGGTCCATCGTCATCGCCGGAGACCAGGGTGCGGGCAAGACGACGCTGCTACGGGCTTTGGTTGACGCTATCCCACCTA
CCGAGCGGTTCGGAACCCTTGAAACTGACTATGAACTGCTCACTCACCTCAATCCAGATCGCGACAATATGGTCGCCTTC
CAGGCCACCGTGGGGCTAGGAGAGAAAGTGGACGGGCATTGCGTGGGCGAGTTCACCGTCGCCGACCTGATTCCGGAGGC
ACTGCGTCAAAACCTCTCGCGTTTGGTGGTGGGCGAGGTTCGTGGCGTTGAGGCAGCTGCCATGTTCGAGGCGATGCAGG
CCGGTGCCGGAACGATGAGCACCACTCACTCCCACTCGGCCACCTCGACCATGGATCGGTTGGCTGGACGAGTTGCCATG
GGAGGGGTCATGACGATTGAGGAGGCCTATCGGCAGATCGCGCACAACATCACGTTCCTCGTGCACGTCACTCTCGTCGA
TGACACCTGGCGAGGAGGCACCCGAACTCGTCACATCACCGAGATCCGCCAACTCACCGGGGCGTTAGAGAATGGGCGAC
CGGTCACCCACCTCACCTATGCTGCGCCAACGCCAACTAGTCCAGGCGTGTTCCACCCGGATCCCGCTCTCGTTGCTGAG
TTGTCCCACTACGAGCCGGAGGTGACGAGATGGGTATGA

Upstream 100 bases:

>100_bases
TGCAAAGTATGGCGGAGTCGATGCGAGAGCGGATCCGTCGAGCAGATCAAGCCATCACCGGACCTGAAATTCTCAGCACG
TCGGCAATGGGAGTGGCGTC

Downstream 100 bases:

>100_bases
ACGCCGCGATTGCCGCACTGCTCGGCGGACTTCTCGTCGGGGGAGTGGTCATGGTAGGCATCGGCATCGCTCCGATTCAC
CAGTTATCCACAGGGCAATC

Product: secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWRTVVSLRRKASERISSERASH
RERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALWSAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCD
RVFVQYGDGRREPGPVVADDDAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR
VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTLETDYELLTHLNPDRDNMVAF
QATVGLGEKVDGHCVGEFTVADLIPEALRQNLSRLVVGEVRGVEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAM
GGVMTIEEAYRQIAHNITFLVHVTLVDDTWRGGTRTRHITEIRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDPALVAE
LSHYEPEVTRWV

Sequences:

>Translated_492_residues
MTIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWRTVVSLRRKASERISSERASH
RERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALWSAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCD
RVFVQYGDGRREPGPVVADDDAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR
VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTLETDYELLTHLNPDRDNMVAF
QATVGLGEKVDGHCVGEFTVADLIPEALRQNLSRLVVGEVRGVEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAM
GGVMTIEEAYRQIAHNITFLVHVTLVDDTWRGGTRTRHITEIRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDPALVAE
LSHYEPEVTRWV
>Mature_491_residues
TIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWRTVVSLRRKASERISSERASHR
ERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALWSAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCDR
VFVQYGDGRREPGPVVADDDAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTRV
TIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTLETDYELLTHLNPDRDNMVAFQ
ATVGLGEKVDGHCVGEFTVADLIPEALRQNLSRLVVGEVRGVEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAMG
GVMTIEEAYRQIAHNITFLVHVTLVDDTWRGGTRTRHITEIRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDPALVAEL
SHYEPEVTRWV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 53803; Mature: 53671

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWR
CCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
TVVSLRRKASERISSERASHRERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
SAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCDRVFVQYGDGRREPGPVVADD
CCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECCCCEEEEEECCCCCCCCCEEECC
DAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR
CHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECEEEE
VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTL
EEHHHHHHHHHCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCC
ETDYELLTHLNPDRDNMVAFQATVGLGEKVDGHCVGEFTVADLIPEALRQNLSRLVVGEV
CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
RGVEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAMGGVMTIEEAYRQIAHNITFL
CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEE
VHVTLVDDTWRGGTRTRHITEIRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDPALVAE
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LSHYEPEVTRWV
HHHCCCHHHCCC
>Mature Secondary Structure 
TIDHAVSRYAQDAPVVPLDDGKDLAGVLSRISPSPHVSPAAVSPRPNPRRFEAKDIDWR
CHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
TVVSLRRKASERISSERASHRERTGVDLSGDDVRMLGRSIVRQAVESHAEKLTAEGQALW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
SAQTKDAYVRAVMDAIFGYGRLQPLFEIQDAENIEINGCDRVFVQYGDGRREPGPVVADD
CCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECCCCEEEEEECCCCCCCCCEEECC
DAELVEAIRFLGESANPPRPFDDAHPTMTVALGSQYRLHAIGFGLSYRPSVVIRHHTLTR
CHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECEEEE
VTIDDLVNTAMMPHHVGVLLRAAVLARRSIVIAGDQGAGKTTLLRALVDAIPPTERFGTL
EEHHHHHHHHHCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHCCCC
ETDYELLTHLNPDRDNMVAFQATVGLGEKVDGHCVGEFTVADLIPEALRQNLSRLVVGEV
CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
RGVEAAAMFEAMQAGAGTMSTTHSHSATSTMDRLAGRVAMGGVMTIEEAYRQIAHNITFL
CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEE
VHVTLVDDTWRGGTRTRHITEIRQLTGALENGRPVTHLTYAAPTPTSPGVFHPDPALVAE
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LSHYEPEVTRWV
HHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]