Click here to switch to the map view.

The map label for this gene is 50841530

Identifier: 50841530

GI number: 50841530

Start: 37044

End: 37682

Strand: Direct

Name: 50841530

Synonym: PPA0039

Alternate gene names: NA

Gene position: 37044-37682 (Clockwise)

Preceding gene: 50841529

Following gene: 50841531

Centisome position: 1.45

GC content: 61.5

Gene sequence:

>639_bases
ATGTCCGTGACGACTACTCCGATATCTGCTCGCGCAACGACGCCATCTCCCCGGCTTCGACGCTCGCCGCGCCTCATCGT
CATAGGGGTGCTATGTGCATGCCTAGGCGGCCTGGGGGGAGCTGTTGCCTGGCACCGCGCCTCTCATGCCGACCAAGTTC
TTGTCATGACGCGAGCTGTAGGGCAGGGAGATATCGTCCGCAATGCCGATATTGGGCTGACTTCAGTGGCCGTCGATCGG
GCCGTCGCAACGATCCCAGCTTCCCAACTCGACAAAATCGTTGGTCGTCATGCTCTGGTCGACCTATCACCAGGACAACT
TCTCGGGTCTCACTCGGTGGGAGAACTACGGGTGGCACCAGGGCGCGCACGGATAGGTCTCAAACTTGCTGCTGGACGCC
TACCCACCGTCTCCCTACCCGCTGGCGCCCGCGTCACCGTGATAGAAACCAGCCCCGACAAGGACACGGGGACTGTTTCT
AATCTGTCAACGGCCGACGCTGTGGTCGTCGCGGCACCCAAGGCGACGAATGATCATGGAAGCTGGTTGGTCGATGTCGA
GGTCGATTCCGGCAATGCTGCCCGACTAGCCGACCTCGCTTCCCTGGACCGCATCGCCCTGGTCGAAAGGGGTCAGTGA

Upstream 100 bases:

>100_bases
ATGCGGTGTGCGCGTGGCACCTGACACCCCGATTTCGGTGTCCACAGATCTTCTGTGCGTCTCTTGCCGCTGATTTCAGC
TGACGCATAGTTTCGCGGCC

Downstream 100 bases:

>100_bases
TGTCGATCATCCTGTTGACCAGCCCTGGGGGAGCCCCGGGCCTGACAACTACCGCTCTCGGCCTGGCTCTTACCTGGCCG
CGAGACGTCGTTCTTGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAVGQGDIVRNADIGLTSVAVDR
AVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAPGRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVS
NLSTADAVVVAAPKATNDHGSWLVDVEVDSGNAARLADLASLDRIALVERGQ

Sequences:

>Translated_212_residues
MSVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAVGQGDIVRNADIGLTSVAVDR
AVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAPGRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVS
NLSTADAVVVAAPKATNDHGSWLVDVEVDSGNAARLADLASLDRIALVERGQ
>Mature_211_residues
SVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAVGQGDIVRNADIGLTSVAVDRA
VATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAPGRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVSN
LSTADAVVVAAPKATNDHGSWLVDVEVDSGNAARLADLASLDRIALVERGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21744; Mature: 21613

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAV
CCEECCCCCCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECC
GQGDIVRNADIGLTSVAVDRAVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAP
CCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCEECCCCCCEEEECC
GRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVSNLSTADAVVVAAPKATNDHG
CCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
SWLVDVEVDSGNAARLADLASLDRIALVERGQ
CEEEEEEECCCCCHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
SVTTTPISARATTPSPRLRRSPRLIVIGVLCACLGGLGGAVAWHRASHADQVLVMTRAV
CEECCCCCCCCCCCCHHHHCCCCEEEHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECC
GQGDIVRNADIGLTSVAVDRAVATIPASQLDKIVGRHALVDLSPGQLLGSHSVGELRVAP
CCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCEECCCCCCEEEECC
GRARIGLKLAAGRLPTVSLPAGARVTVIETSPDKDTGTVSNLSTADAVVVAAPKATNDHG
CCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
SWLVDVEVDSGNAARLADLASLDRIALVERGQ
CEEEEEEECCCCCHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA