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The map label for this gene is yraA

Identifier: 50812271

GI number: 50812271

Start: 2757492

End: 2758001

Strand: Direct

Name: yraA

Synonym: BSU27020

Alternate gene names: 50812271

Gene position: 2757492-2758001 (Clockwise)

Preceding gene: 255767623

Following gene: 255767625

Centisome position: 65.41

GC content: 42.75

Gene sequence:

>510_bases
ATGAGCAAAAAAATTGCAGTTCTTGTTACAGACCAATTCGAAGACATCGAATATACAAGTCCGGTAAAAGCATACGAAGA
AGCTGGCTACAGTGTTGTGGCTATCGATTTGGAAGCCGGCAAAGAAGTTACCGGTAAGCATGGCGAGAAAGTAAAGATTG
ACAAAGCCATCTCTGATGTGGATGCAAGTGACTTTGATGCACTTTTAATTCCTGGGGGATTCTCTCCGGATTTGCTTCGT
GCAGATGACCGTCCGGGTGAATTCGCAAAAGCATTTGTCGAAAACAAAAAACCTGTTTTCGCAATTTGCCACGGCCCGCA
AGTACTGATTGATACGGATCTTCTAAAAGGCAAAGATATCACAGGCTACCGCAGCATCCGCAAAGATTTAATCAATGCCG
GTGCAAACTACAAAGATGCAGAAGTAGTCGTCAGCCACAACATTGTCACAAGCAGAACACCTGATGATTTGGAAGCATTT
AACCGCGAATCTTTAAACTTGTTAAAATAA

Upstream 100 bases:

>100_bases
TATTGAAACTCACGAAAAATGATCTCTTTAAGCAAATATTTTGAAGGCCGGTCAATCTTCCTGTTATTCTATGAATAGAG
AGTTATTAGGAGGGTTTTTT

Downstream 100 bases:

>100_bases
CAAGAAGGCACAGACTGTTCGGGTCTGTGCCTTTTTTAAAATTAAGACTCCTTCGTTACATTCTGAAAGACAGCAGTCGC
GTCCCACACATTCAAGCCAA

Product: general stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSKKIAVLVTDQFEDIEYTSPVKAYEEAGYSVVAIDLEAGKEVTGKHGEKVKIDKAISDVDASDFDALLIPGGFSPDLLR
ADDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAF
NRESLNLLK

Sequences:

>Translated_169_residues
MSKKIAVLVTDQFEDIEYTSPVKAYEEAGYSVVAIDLEAGKEVTGKHGEKVKIDKAISDVDASDFDALLIPGGFSPDLLR
ADDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAF
NRESLNLLK
>Mature_168_residues
SKKIAVLVTDQFEDIEYTSPVKAYEEAGYSVVAIDLEAGKEVTGKHGEKVKIDKAISDVDASDFDALLIPGGFSPDLLRA
DDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDITGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAFN
RESLNLLK

Specific function: Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain

Homologues:

Organism=Escherichia coli, GI87082219, Length=170, Percent_Identity=57.0588235294118, Blast_Score=191, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28571932, Length=171, Percent_Identity=26.9005847953216, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRAA_BACSU (O06006)

Other databases:

- EMBL:   X92868
- EMBL:   AL009126
- PIR:   A69970
- RefSeq:   NP_390580.2
- ProteinModelPortal:   O06006
- SMR:   O06006
- EnsemblBacteria:   EBBACT00000002560
- GeneID:   937603
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27020
- GenoList:   BSU27020
- GeneTree:   EBGT00050000000998
- HOGENOM:   HBG646910
- OMA:   QSELEVP
- PhylomeDB:   O06006
- ProtClustDB:   CLSK904612
- BioCyc:   BSUB:BSU27020-MONOMER
- InterPro:   IPR006286
- InterPro:   IPR002818
- TIGRFAMs:   TIGR01382

Pfam domain/function: PF01965 DJ-1_PfpI

EC number: NA

Molecular weight: Translated: 18512; Mature: 18381

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS51276 PEPTIDASE_C56_PFPI

Important sites: ACT_SITE 103-103 ACT_SITE 104-104

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKIAVLVTDQFEDIEYTSPVKAYEEAGYSVVAIDLEAGKEVTGKHGEKVKIDKAISDV
CCCEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECHHHCCC
DASDFDALLIPGGFSPDLLRADDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDI
CCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCC
TGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAFNRESLNLLK
CHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKKIAVLVTDQFEDIEYTSPVKAYEEAGYSVVAIDLEAGKEVTGKHGEKVKIDKAISDV
CCEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECHHHCCC
DASDFDALLIPGGFSPDLLRADDRPGEFAKAFVENKKPVFAICHGPQVLIDTDLLKGKDI
CCCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCC
TGYRSIRKDLINAGANYKDAEVVVSHNIVTSRTPDDLEAFNRESLNLLK
CHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9384377; 10568751