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The map label for this gene is yojE

Identifier: 50812251

GI number: 50812251

Start: 2123026

End: 2123922

Strand: Reverse

Name: yojE

Synonym: BSU19480

Alternate gene names: 50812251

Gene position: 2123922-2123026 (Counterclockwise)

Preceding gene: 16079009

Following gene: 255767457

Centisome position: 50.38

GC content: 45.93

Gene sequence:

>897_bases
ATGCAACATGCAGAAACAAAAAAAGGCGTTATTTACACAGCCGTTTCATTTATCATGTGGGGCCTGTTTCCGCTCTATTG
GAAGCTTCTCGAACAGCTGCCGGCTCTTGATATTTTGGCTCATCGTATTATATGGTCTTTTGTTTTTATGTGTATCGTAC
TTTTTTTCTTGCGGCAATGGAAAATAGGATGGCAGGAGTTGCGCTCTCTGAAAAAGAACGGAGGGATCCTCTCTTTATTT
CTTGCTTCTATCCTGATTTCGATCAACTGGTTTGTATACATATGGGCTGTCAACCATGGCTTTTTGCTTGAGGCTAGTCT
TGGCTATTACATTAATCCGCTTGTATCAGTGCTCCTTGGGATTTTATTTTTAAAGGAAAAACTGAATCGCCTGCAATTAG
TGGCCGTTTCGATTGCGGCAGCCGGTGTCATCATCTCGGCGTTCCAATACGGCTCCATTCCTTATGTTGCGCTTCTGCTC
GCATTCAGCTTTGGGCTGTACGGGTTAAGCAAAAAAAGAACAAGCCTGCCGAGCGCCATCGGTTTAACGCTGGAAACATT
CATGATTATGCCCATTGCATTGGGGTATTTGCTGTTCAGCGGACATGTTCAGCCAGCGGGTGCAGAAAGCGGAGGGACGT
GGCTGCTTCTCTTTTTGGCCGGTGTGTTTACGGCTTTGCCGCTCTTATTGTTTGCGGAAGGAGCGAAACGGCTGCCACTG
TATCAAGTCGGTATCTTACAATATATTGCGCCGACCATTACCCTGCTGATCGGGCTGTTTGTTTACCATGAGCCATTTTC
AAGCTCGAAGGCTTTTACATTCAGCTGTATATGGGCTGCGCTGCTCTTGTTTACGTTTTCACAAGTGAAGTGGAAACGGG
CGTCAAAAAGCCATTGA

Upstream 100 bases:

>100_bases
ATTGTCTTCACATCCTTTCTTCACGGACAAAATAGTATATGCCCACCAGATCTTTCACGTGATATAATATAAGATGCTCT
AAAGAAAGGCAGGGATATCA

Downstream 100 bases:

>100_bases
GGCCTTTGGCTTTTCAGCTGATGCATATATTATGTATAATCATTTCATGTATGTAAGACATAAAGGAGCAAGACGATGGA
CAATGATAAAGAGATAGTGA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQHAETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIGWQELRSLKKNGGILSLF
LASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQYGSIPYVALLL
AFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKSH

Sequences:

>Translated_298_residues
MQHAETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIGWQELRSLKKNGGILSLF
LASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQYGSIPYVALLL
AFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKSH
>Mature_298_residues
MQHAETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIGWQELRSLKKNGGILSLF
LASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQYGSIPYVALLL
AFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPL
YQVGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKSH

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains

Homologues:

Organism=Escherichia coli, GI48994976, Length=299, Percent_Identity=39.1304347826087, Blast_Score=215, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOJE_BACSU (O31859)

Other databases:

- EMBL:   AF026147
- EMBL:   AL009126
- PIR:   B69906
- RefSeq:   NP_389830.2
- ProteinModelPortal:   O31859
- EnsemblBacteria:   EBBACT00000002359
- GeneID:   939447
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19480
- GenoList:   BSU19480
- GeneTree:   EBGT00050000001299
- HOGENOM:   HBG649355
- OMA:   ITFGFIW
- PhylomeDB:   O31859
- ProtClustDB:   CLSK928141
- BioCyc:   BSUB:BSU19480-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000620
- InterPro:   IPR004626
- TIGRFAMs:   TIGR00688

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 33383; Mature: 33383

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xea5d660)-; HASH(0xf04291c)-; HASH(0xf67f590)-; HASH(0xf84cebc)-; HASH(0xfe1c3cc)-; HASH(0xf914238)-; HASH(0xb66d39c)-; HASH(0xd15ca1c)-; HASH(0xf717ea0)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHAETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGWQELRSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLG
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHH
ILFLKEKLNRLQLVAVSIAAAGVIISAFQYGSIPYVALLLAFSFGLYGLSKKRTSLPSAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHH
GLTLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YQVGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKSH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MQHAETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIGWQELRSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLG
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHHHH
ILFLKEKLNRLQLVAVSIAAAGVIISAFQYGSIPYVALLLAFSFGLYGLSKKRTSLPSAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHH
GLTLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
YQVGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKSH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377