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The map label for this gene is yrdC [C]

Identifier: 50365446

GI number: 50365446

Start: 737006

End: 737512

Strand: Reverse

Name: yrdC [C]

Synonym: Mfl630

Alternate gene names: 50365446

Gene position: 737512-737006 (Counterclockwise)

Preceding gene: 50365447

Following gene: 50365445

Centisome position: 92.98

GC content: 21.7

Gene sequence:

>507_bases
ATGTTAAGTAAAGATCTAATAATTAAAGCTACAAATGCTCTTATAGAAAATGAAATTATTATTTTACCAACTGATACTAT
CTATGGATTATCAGCGATTTGAAATTTTGAAAATGAAAAAAGAATAAATAATATAAAAAATGCAAACGAAGAAAAACCTT
TAATTGTTTTAATATCAAACATAGAACAGCTAAGCATTTTGGGCATTGAAAAAAATGAATTTGTAGATTTATTGTTCAAT
GAAAGTACAACAGTTATTTTTAAAACAAAAAGTAATAATAAAACTATAGCAGTTAGATTAATAATTAGAGATGATATAAA
AAAAATTATTGAAAAAACTGGACCGATATTTTCTACAAGTGTTAATTTACATGGAGAGCAACCAATAAATGAGAAAGACG
AATTAATTAATTTTGATAGATCAATTAATGTTTATTTTGATAAAGTTATTACAAACATTAAACCATCAAAAATTTATAAT
TCTATAACAAATATATGAGTACGATAA

Upstream 100 bases:

>100_bases
ATTGGATTTAATATTATGAAAACAACTATATTTAAAAAGAGAGTTGGTGCTCAAATTTTATTTTCAGAAATTTTAGCTAA
AAGAAGAAAAGGGAATAAAA

Downstream 100 bases:

>100_bases
AATCAAAATTTAATATCAATGATATTTCAGAGTATTTTGAATTTGATGATAATTGTTCAAGTTTTAAATTAATTAATAGT
ATTGATTACAATGATAAAAA

Product: putative translation factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLSKDLIIKATNALIENEIIILPTDTIYGLSAIWNFENEKRINNIKNANEEKPLIVLISNIEQLSILGIEKNEFVDLLFN
ESTTVIFKTKSNNKTIAVRLIIRDDIKKIIEKTGPIFSTSVNLHGEQPINEKDELINFDRSINVYFDKVITNIKPSKIYN
SITNIWVR

Sequences:

>Translated_168_residues
MLSKDLIIKATNALIENEIIILPTDTIYGLSAI*NFENEKRINNIKNANEEKPLIVLISNIEQLSILGIEKNEFVDLLFN
ESTTVIFKTKSNNKTIAVRLIIRDDIKKIIEKTGPIFSTSVNLHGEQPINEKDELINFDRSINVYFDKVITNIKPSKIYN
SITNI*VR
>Mature_168_residues
MLSKDLIIKATNALIENEIIILPTDTIYGLSAI*NFENEKRINNIKNANEEKPLIVLISNIEQLSILGIEKNEFVDLLFN
ESTTVIFKTKSNNKTIAVRLIIRDDIKKIIEKTGPIFSTSVNLHGEQPINEKDELINFDRSINVYFDKVITNIKPSKIYN
SITNI*VR

Specific function: Binds Preferentially To Double-Stranded RNA. [C]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18893; Mature: 18893

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKDLIIKATNALIENEIIILPTDTIYGLSAINFENEKRINNIKNANEEKPLIVLISNI
CCCCCEEEEECCHHHCCCEEEEECCCEECEEEECCCCHHHHHHCCCCCCCCCEEEEEECC
EQLSILGIEKNEFVDLLFNESTTVIFKTKSNNKTIAVRLIIRDDIKKIIEKTGPIFSTSV
CEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHCCCEEEEEE
NLHGEQPINEKDELINFDRSINVYFDKVITNIKPSKIYNSITNIVR
ECCCCCCCCCCHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLSKDLIIKATNALIENEIIILPTDTIYGLSAINFENEKRINNIKNANEEKPLIVLISNI
CCCCCEEEEECCHHHCCCEEEEECCCEECEEEECCCCHHHHHHCCCCCCCCCEEEEEECC
EQLSILGIEKNEFVDLLFNESTTVIFKTKSNNKTIAVRLIIRDDIKKIIEKTGPIFSTSV
CEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHCCCEEEEEE
NLHGEQPINEKDELINFDRSINVYFDKVITNIKPSKIYNSITNIVR
ECCCCCCCCCCHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA